Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18]
2,187 sequences; 412,924,424 total letters
Query= AAMG01001435.1
Length=587
Score E
Sequences producing significant alignments: (Bits) Value
seq833 109 2e-21
>seq833
Length=5542
Score = 109 bits (120), Expect = 2e-21
Identities = 175/248 (71%), Gaps = 4/248 (2%)
Strand=Plus/Minus
Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60
|||||||||||||| |||||| | ||||| || || || || |||||| ||||||| ||
Sbjct 3414 TCGATGTACGGCGGCGGTTTTTCTACGGTGCCTGCGTATCTTGCCGACATGTTCGGCACC 3355
Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120
| || || | || ||||||||| |||| ||||| ||||| ||||| ||||| |
Sbjct 3354 GCGTACGTTGGCGGCATACACGGTCGCTTGCTCACCGCGTGGGCCGCGGCCGGCGTTGCG 3295
Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCA-GTTGAGCATCG-GCGTTGAACGCG 178
|| || | |||| ||||| | |||| ||| | || | |||| | || |||| |||
Sbjct 3294 GGACCAACGGTGGTCAACTACATCCGTGCCTATGAGGTCGCGCATGGCGCTGTGAAGGCG 3235
Query 179 CTGCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCT 238
| || || || || || |||| | || ||||| || ||||| ||| |||
Sbjct 3234 --GACGCATACACGATGACGGTGCACATTATGGCATCGCTGCTCGTACTGGGATTCTTCT 3177
Query 239 GCAACCTG 246
||||||||
Sbjct 3176 GCAACCTG 3169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1775961158880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |