Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= AAMG01001435.1 Length=587 Score E Sequences producing significant alignments: (Bits) Value seq833 109 2e-21 >seq833 Length=5542 Score = 109 bits (120), Expect = 2e-21 Identities = 175/248 (71%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 |||||||||||||| |||||| | ||||| || || || || |||||| ||||||| || Sbjct 3414 TCGATGTACGGCGGCGGTTTTTCTACGGTGCCTGCGTATCTTGCCGACATGTTCGGCACC 3355 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120 | || || | || ||||||||| |||| ||||| ||||| ||||| ||||| | Sbjct 3354 GCGTACGTTGGCGGCATACACGGTCGCTTGCTCACCGCGTGGGCCGCGGCCGGCGTTGCG 3295 Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCA-GTTGAGCATCG-GCGTTGAACGCG 178 || || | |||| ||||| | |||| ||| | || | |||| | || |||| ||| Sbjct 3294 GGACCAACGGTGGTCAACTACATCCGTGCCTATGAGGTCGCGCATGGCGCTGTGAAGGCG 3235 Query 179 CTGCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCT 238 | || || || || || |||| | || ||||| || ||||| ||| ||| Sbjct 3234 --GACGCATACACGATGACGGTGCACATTATGGCATCGCTGCTCGTACTGGGATTCTTCT 3177 Query 239 GCAACCTG 246 |||||||| Sbjct 3176 GCAACCTG 3169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1775961158880