Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq7 73.4 7e-11 >seq7 Length=49172423 Score = 73.4 bits (80), Expect = 7e-11 Identities = 101/140 (72%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||||| |||| | || ||| || || || ||||| || ||||| || Sbjct 2217255 CATGGAATGCTTCTT-GTGGTACATCAACGGAACCAACACGTTTCATTCGCTTTTTCCCT 2217313 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 ||||||||||||| | ||||| ||| || | | ||||| ||||| || ||||| Sbjct 2217314 TCCTTTTGCTTCTCCAAAAGCTTCTTCTTTCGAGTAATATCACCACCGTAACACTTGGCA 2217373 Query 217 AGTACGTTCTTTCTGAGAGC 236 || || || ||||| | ||| Sbjct 2217374 AGAACATTTTTTCTCATAGC 2217393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838381664192