Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq618 401 9e-110
seq3688 365 7e-99
seq9685 127 3e-27
seq137676 125 1e-26
>seq618
Length=12052
Score = 401 bits (444), Expect = 9e-110
Identities = 245/256 (96%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1806 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1749
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1748 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 1689
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1688 CCCGGGCCTGTCGGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 1629
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1628 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAG 1569
Query 241 GCCAT-CTCCCTCGAA 255
||| | |||||| ||
Sbjct 1568 GCCGTAGTCCCTCTAA 1553
>seq3688
Length=5029
Score = 365 bits (404), Expect = 7e-99
Identities = 228/241 (95%), Gaps = 3/241 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct 4629 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCATACTAGGAATT-C 4686
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4687 CTTGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 4746
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 4747 CCCGGGCCTGTCGGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 4806
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||
Sbjct 4807 CCCAGAACAT-TAAGGGCATCATAGACCTGTTATTGCCTCAAACTTCCACGACCTAAAAG 4865
Query 241 G 241
|
Sbjct 4866 G 4866
>seq9685
Length=2322
Score = 127 bits (140), Expect = 3e-27
Identities = 204/274 (74%), Gaps = 38/274 (14%)
Strand=Plus/Plus
Query 1 GTACAA-AGGGCAG-GGACGTAGTC--AACGCGAGCTTGATGACTCG-CGCTTACTAGGA 55
|||||| ||||||| |||||||||| ||||||||| ||||||||| ||||| |||
Sbjct 703 GTACAAGAGGGCAGCGGACGTAGTCCAAACGCGAGC--GATGACTCGGCGCTTTACAGGC 760
Query 56 ATTTCCTCGTTGA-AGACCAACAATTGCAATGATCTA---TCCCCATCACGATGAAATT- 110
|||| |||| || |||||||||||| ||| |||||||||||||||||||
Sbjct 761 --TTCCCGTTTGACAGCCCAACAATTGCAGCTCGCTACACTCCCCATCACGATGAAATTC 818
Query 111 TCAAA-GATTACCC--GGACCTGTCGGCCAA--GGTGATAGAC--TCGTTGAATACATCA 163
||||| |||||||| || ||||||||||| || ||| || ||||||| |||||||
Sbjct 819 TCAAAAGATTACCCCGGGCGCTGTCGGCCAACCGGCTATAAACCCTCGTTGACTACATCA 878
Query 164 GTGTAG-CGCGC-GT--GCGGCCCAGAACATCTAAGGGCATCAC-----AGACCTGTTAT 214
|||||| ||||| || ||||| | || ||||| ||||| || ||||||||
Sbjct 879 GTGTAGCCGCGCAGTCGGCGGCACGACACTCGTAAGGCAATCACACCAGAGCCCTGTTAT 938
Query 215 ------TGCCTCAAACTTCC--GTGGCCTAAAAG 240
||||||||||||| ||||||||||
Sbjct 939 GGGGGGGGCCTCAAACTTCCCGCGGGCCTAAAAG 972
>seq137676
Length=979
Score = 125 bits (138), Expect = 1e-26
Identities = 74/77 (96%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 169 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 961
Query 229 GTGGCCTAAAAGGCCAT 245
||||||| | ||||||
Sbjct 962 ATGGCCTAGACGGCCAT 978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750609468340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |