Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq618 131 9e-29
seq153850 87.8 1e-15
>seq618
Length=12052
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||||| ||||| || |||||| ||
Sbjct 1276 GAACCCAAATACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 1217
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 1216 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1160
Score = 111 bits (122), Expect = 9e-23
Identities = 97/118 (82%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGA-GTCAAAATGATAACATCGCC 59
|||| |||| |||||||||| || |||||||||| |||| ||| || |||||| |
Sbjct 9653 GAACTCAAATACTTTGATTTTTCATAAGGTGCCG-GCGAAGTCCTAAAAGCAACATCCGC 9595
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||| ||| |||| ||||| |||| |||||| |||||||| |||||||||||||
Sbjct 9594 CGATCCCTGGTCAGCATTGTTTATGGTTGAGACTAGGACGGTATATGATCGTCTTCGA 9537
>seq153850
Length=5434
Score = 87.8 bits (96), Expect = 1e-15
Identities = 97/119 (82%), Gaps = 9/119 (8%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||| ||||| || |||||||||| || |||| || | ||||| ||
Sbjct 64 GAACCCAAATACTT-GATTT-TCATAAGGTGCCG-GC-AGTCCTAAAGC--ACATCCGCC 117
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGAC-TACGACGG-TATCTGATCGTCTTCGA 117
| ||||| |||||||| ||||| |||| |||| || ||||| |||||||||||||||||
Sbjct 118 G-TCCCTGGTCGGCATCGTTTATGGTTGAGACATAGGACGGCTATCTGATCGTCTTCGA 175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 277901813640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |