Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq618 131 9e-29 seq153850 87.8 1e-15 >seq618 Length=12052 Score = 131 bits (144), Expect = 9e-29 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || |||||| || Sbjct 1276 GAACCCAAATACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 1217 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 1216 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1160 Score = 111 bits (122), Expect = 9e-23 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGA-GTCAAAATGATAACATCGCC 59 |||| |||| |||||||||| || |||||||||| |||| ||| || |||||| | Sbjct 9653 GAACTCAAATACTTTGATTTTTCATAAGGTGCCG-GCGAAGTCCTAAAAGCAACATCCGC 9595 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||| |||| ||||| |||| |||||| |||||||| ||||||||||||| Sbjct 9594 CGATCCCTGGTCAGCATTGTTTATGGTTGAGACTAGGACGGTATATGATCGTCTTCGA 9537 >seq153850 Length=5434 Score = 87.8 bits (96), Expect = 1e-15 Identities = 97/119 (82%), Gaps = 9/119 (8%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||| ||||| || |||||||||| || |||| || | ||||| || Sbjct 64 GAACCCAAATACTT-GATTT-TCATAAGGTGCCG-GC-AGTCCTAAAGC--ACATCCGCC 117 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGAC-TACGACGG-TATCTGATCGTCTTCGA 117 | ||||| |||||||| ||||| |||| |||| || ||||| ||||||||||||||||| Sbjct 118 G-TCCCTGGTCGGCATCGTTTATGGTTGAGACATAGGACGGCTATCTGATCGTCTTCGA 175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277901813640