Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq618 221 5e-55 seq113941 116 2e-23 >seq618 Length=12052 Score = 221 bits (244), Expect = 5e-55 Identities = 222/282 (79%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG-TGTCA 463 || ||||||||| ||||||||||||||||||| |||| | ||||||| ||| | | Sbjct 3241 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCTAGTA 3300 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGG-TGCACCATCGA 521 ||||||| | || || ||| ||| ||| | | ||| ||||| |||||| ||| Sbjct 3301 AACCCGTAAGGCGCAAGGAAGCTGACCGGCGC-GATCCCCCTCGAGGGGTGCACCGCCGA 3359 Query 522 CCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGAT 581 |||| | |||| | | || || || |||| ||||||| | || |||||||||||||| Sbjct 3360 CCGACCTTGATCTTCTGAGAAGGGTTCGAGT--GAGCATACCCGTCGGGACCCGAAAGAT 3417 Query 582 GGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGT 641 |||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | Sbjct 3418 GGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGAT 3477 Query 642 TCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 3478 ACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 3519 Score = 163 bits (180), Expect = 1e-37 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 2857 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 2916 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 2917 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 2976 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 2977 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 3021 >seq113941 Length=1050 Score = 116 bits (128), Expect = 2e-23 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106 |||||||||||||||| | |||| |||| |||||||| | || || |||| |||| || Sbjct 577 GTTGTTTGGGAATGCAACGCTAAGTGGGTGGTAAATTCCATCCAAGGCTAGATATGAGCA 518 Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166 |||||| |||||| | ||||| | | |||||||||||| |||||| ||||||||| Sbjct 517 AGAGACTGATAGCAAATAAGTACCGCAAGAGAAAGATGAAAATGACTTTGAAAAGAGAGT 458 Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 || | || | ||||||| | |||||||| Sbjct 457 TATAGAGTGCTTGAAATTTCCAAGAGGGAAGC 426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2075905709800