Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq3962 269 7e-70
seq21829 242 9e-62
seq26345 98.7 2e-18
>seq3962
Length=38492
Score = 269 bits (298), Expect = 7e-70
Identities = 308/418 (74%), Gaps = 27/418 (6%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| ||| ||| ||||||| ||| ||||||
Sbjct 34082 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 34023
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34022 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 33963
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188
| ||||||||||||||| |||||||||||| || ||| | | | || | |||
Sbjct 33962 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 33903
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| || |||||||||||| |||||||||||| ||| |||| | ||| || |||
Sbjct 33902 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 33843
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
|| ||| |||||||||| ||||||||||| |||||||| || |||||
Sbjct 33842 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 33789
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
||| ||| | ||| | ||||||||||||||||||| || ||
Sbjct 33788 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 33746
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
||||| |||||||| ||||| |||| || ||| ||||||||||||| | ||||
Sbjct 33745 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 33688
>seq21829
Length=24115
Score = 242 bits (268), Expect = 9e-62
Identities = 301/414 (73%), Gaps = 25/414 (6%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
||| | |||||||||| | || ||||||||||| | ||| | |||||||||| ||
Sbjct 21423 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 21364
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 21363 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 21304
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
| |||| ||||| ||||||||||||||||| ||| || | ||| | |||||
Sbjct 21303 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGTTTCCATTCAAAGC--------AACTAAC 21252
Query 187 CC--CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGT 244
| | | ||||||| |||||||||||| |||| || |||||| || || |
Sbjct 21251 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 21192
Query 245 GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCA 304
|| ||||||| ||||||||||||||||||||||| | |||||||| | | | |
Sbjct 21191 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 21132
Query 305 TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364
| | | | || || |||| ||||||||||||||||||| |
Sbjct 21131 TAATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGT 21087
Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418
| ||||||| ||||||||| | ||||||||||||||| | |||| ||||||
Sbjct 21086 CATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTAC 21033
>seq26345
Length=3026
Score = 98.7 bits (108), Expect = 2e-18
Identities = 71/78 (91%), Gaps = 3/78 (4%)
Strand=Plus/Plus
Query 79 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTA 138
||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||
Sbjct 1890 TTCGTGCGGGTCGGAACTTACCCGATAAGGAATTTCGCTACCTTAGG-CCGTTATAGTTA 1948
Query 139 CGGCCGCCGTTTACCGGG 156
| |||||| || ||||||
Sbjct 1949 C-GCCGCC-TTCACCGGG 1964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1258393435392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |