Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq3962 338 1e-90
seq21829 264 2e-68
seq26345 105 1e-20
>seq3962
Length=38492
Score = 338 bits (374), Expect = 1e-90
Identities = 289/353 (82%), Gaps = 8/353 (2%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 34082 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 34023
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34022 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 33963
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 33962 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 33903
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 33902 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 33843
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 33842 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 33783
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 33782 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 33731
>seq21829
Length=24115
Score = 264 bits (292), Expect = 2e-68
Identities = 284/376 (76%), Gaps = 20/376 (5%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | ||||||||||| ||| || ||||||| | |
Sbjct 21423 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 21364
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 21363 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 21304
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
| |||| |||||| |||||||||||| |||| || |||| || |||||
Sbjct 21303 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGTTTCCATTCAAAGC--------AACTAAC 21252
Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
| || |||| |||||||||||||||||||| ||||| ||||||||||| || | |
Sbjct 21251 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 21192
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298
||||||||| ||||||||||| |||||||||||| ||| | | ||| || | |
Sbjct 21191 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 21132
Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348
| ||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 21131 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 21072
Query 349 CTTAACAATAGTTCTC 364
||| || ||||||
Sbjct 21071 CTTCGACATGGTTCTC 21056
>seq26345
Length=3026
Score = 105 bits (116), Expect = 1e-20
Identities = 73/79 (92%), Gaps = 3/79 (4%)
Strand=Plus/Plus
Query 72 TTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTT 131
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 1889 TTTCGTGCGGGTCGGAACTTACCCGATAAGGAATTTCGCTACCTTAGG-CCGTTATAGTT 1947
Query 132 ACGGCCGCCGTTTACTGGG 150
|| |||||| || || |||
Sbjct 1948 AC-GCCGCC-TTCACCGGG 1964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1060372133376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |