Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq3962 480 2e-133
seq96932 306 1e-80
seq5414 188 2e-45
seq34440 82.4 2e-13
>seq3962
Length=38492
Score = 480 bits (532), Expect = 2e-133
Identities = 407/497 (82%), Gaps = 3/497 (1%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 28938 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 28997
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| |||| |||||||||||||||| |||||||| | || ||||
Sbjct 28998 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 29057
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180
| || | ||||| | || |||||| || | ||||||| ||||||| |||||||||
Sbjct 29058 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 29115
Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240
|||||| ||| || ||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 29116 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 29175
Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300
|||| || | || || || || | |||||||||||| || ||||||||||||| |||
Sbjct 29176 CATCGTTGAATTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 29235
Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360
|||||||| ||||||||||||||||| ||||| |||||||||||||||||| | ||
Sbjct 29236 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 29295
Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420
|||||| |||| |||||||| ||| || |||| ||| || ||||||||||||||
Sbjct 29296 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAGTTCGGATTG 29355
Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479
|| |||||||||| || ||||||| ||||||||||||||||| | |||| ||| |
Sbjct 29356 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 29415
Query 480 CGGTGAATACGTTCCCG 496
|||||||| ||||||||
Sbjct 29416 CGGTGAATTCGTTCCCG 29432
>seq96932
Length=352
Score = 306 bits (338), Expect = 1e-80
Identities = 289/356 (81%), Gaps = 12/356 (3%)
Strand=Plus/Plus
Query 20 CTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAA 79
||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | |
Sbjct 1 CTCAAAGGAATTGACGGGGGCCCGCACAAGTGGTGGAGCATGTGGTTTAATTCGATGATA 60
Query 80 CGCGAAGAACCTTACCAAATCTTGACATCCTC-TGACCC-CTCTAGAGATAGAGGTTTCC 137
||||| |||||||||| | || || || | | ||||| ||| |||||| ||| || |
Sbjct 61 CGCGAGGAACCTTACCTAGGCTAGA-ATGCGCGTGACCGGCTC-AGAGAT-GAGCCTTTC 117
Query 138 CCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGT 197
| |||||| ||| || | |||| ||||||| |||||||||||||| |||||| |||
Sbjct 118 C-TTCGGGACACAAAGCAA--GGTGCTGCATGGCCGTCGTCAGCTCGTGCCGTGAGGTGT 174
Query 198 TGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCA--TTAAGTTGGG 255
||||||||||||||||||||||||||||| || |||||||||| || | ||| ||||
Sbjct 175 TGGGTTAAGTCCCGCAACGAGCGCAACCCCTATAGTTAGTTGCCAGCACGTAAAGGTGGG 234
Query 256 CACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGGGGACGACGTCAAATCATC 314
|||||| | ||||||| | | ||| | | |||||||| ||||||||||||| |||||
Sbjct 235 GACTCTAGCTAGACTGCCTGCG-CAAGCAGTGAGGAAGGCGGGGACGACGTCAGGTCATC 293
Query 315 ATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGC 370
||| |||||| | | |||| |||||||||||||||||||| |||| ||| |||
Sbjct 294 ATGGCCCTTACGCCTAGGGCGACACACGTGCTACAATGGACGGTACAGCGGGTAGC 349
>seq5414
Length=36579
Score = 188 bits (208), Expect = 2e-45
Identities = 184/236 (78%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326
|||| || |||| | || ||||||||||||||| |||||||| || |||| ||||||||
Sbjct 4916 GACTACCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 4857
Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386
||||| |||||||||||||||||| | ||||| ||| ||| | | | ||| |
Sbjct 4856 GGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGA 4797
Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446
|| ||| || |||| | ||||||||||||||| ||||||||||| | ||||||
Sbjct 4796 GCGAAT-CCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGT 4738
Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502
|||||||||||||||||| ||||||||||| ||||||||| || | || ||||
Sbjct 4737 TGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACACGGGCCCT 4682
Score = 167 bits (184), Expect = 7e-39
Identities = 175/229 (76%), Gaps = 12/229 (5%)
Strand=Plus/Minus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 5521 TACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCAT 5462
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| ||||||| | |||||||||| ||||||| | |||
Sbjct 5461 GTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACA---TATGA------ 5411
Query 121 TAGAGATAGAGGTTTCCCCTTCGGG--GGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178
| | | | | ||| |||| | || ||||||| ||||||| |||||||
Sbjct 5410 -ACAACAAAACCTGTCCTTAACGGGATGTACTTTCATACAGGTGTTGCATGGCTGTCGTC 5352
Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227
|||||||||||||||||||| ||| |||||| |||||||| ||||||
Sbjct 5351 AGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTTTAACGAGCGAAACCCT 5303
>seq34440
Length=3381
Score = 82.4 bits (90), Expect = 2e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 158 AGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGA 217
||||| ||||||| ||||||||||||||||||||| ||||| ||| |||||| |||||
Sbjct 2575 AGGTGTTGCATGGCTGTCGTCAGCTCGTGTCGTGAAATGTTTGGTCAAGTCCTTTAACGA 2516
Query 218 GCGCAACCCT 227
|| ||||||
Sbjct 2515 GCAAAACCCT 2506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1501129224960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |