Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq3962 480 2e-133 seq96932 306 1e-80 seq5414 188 2e-45 seq34440 82.4 2e-13 >seq3962 Length=38492 Score = 480 bits (532), Expect = 2e-133 Identities = 407/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 28938 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 28997 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 28998 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 29057 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 29058 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 29115 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 29116 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 29175 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 |||| || | || || || || | |||||||||||| || ||||||||||||| ||| Sbjct 29176 CATCGTTGAATTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 29235 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 29236 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 29295 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || |||| ||| || |||||||||||||| Sbjct 29296 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAGTTCGGATTG 29355 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 29356 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 29415 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 29416 CGGTGAATTCGTTCCCG 29432 >seq96932 Length=352 Score = 306 bits (338), Expect = 1e-80 Identities = 289/356 (81%), Gaps = 12/356 (3%) Strand=Plus/Plus Query 20 CTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAA 79 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | | Sbjct 1 CTCAAAGGAATTGACGGGGGCCCGCACAAGTGGTGGAGCATGTGGTTTAATTCGATGATA 60 Query 80 CGCGAAGAACCTTACCAAATCTTGACATCCTC-TGACCC-CTCTAGAGATAGAGGTTTCC 137 ||||| |||||||||| | || || || | | ||||| ||| |||||| ||| || | Sbjct 61 CGCGAGGAACCTTACCTAGGCTAGA-ATGCGCGTGACCGGCTC-AGAGAT-GAGCCTTTC 117 Query 138 CCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGT 197 | |||||| ||| || | |||| ||||||| |||||||||||||| |||||| ||| Sbjct 118 C-TTCGGGACACAAAGCAA--GGTGCTGCATGGCCGTCGTCAGCTCGTGCCGTGAGGTGT 174 Query 198 TGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCA--TTAAGTTGGG 255 ||||||||||||||||||||||||||||| || |||||||||| || | ||| |||| Sbjct 175 TGGGTTAAGTCCCGCAACGAGCGCAACCCCTATAGTTAGTTGCCAGCACGTAAAGGTGGG 234 Query 256 CACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGGGGACGACGTCAAATCATC 314 |||||| | ||||||| | | ||| | | |||||||| ||||||||||||| ||||| Sbjct 235 GACTCTAGCTAGACTGCCTGCG-CAAGCAGTGAGGAAGGCGGGGACGACGTCAGGTCATC 293 Query 315 ATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGC 370 ||| |||||| | | |||| |||||||||||||||||||| |||| ||| ||| Sbjct 294 ATGGCCCTTACGCCTAGGGCGACACACGTGCTACAATGGACGGTACAGCGGGTAGC 349 >seq5414 Length=36579 Score = 188 bits (208), Expect = 2e-45 Identities = 184/236 (78%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 |||| || |||| | || ||||||||||||||| |||||||| || |||| |||||||| Sbjct 4916 GACTACCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 4857 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386 ||||| |||||||||||||||||| | ||||| ||| ||| | | | ||| | Sbjct 4856 GGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGA 4797 Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446 || ||| || |||| | ||||||||||||||| ||||||||||| | |||||| Sbjct 4796 GCGAAT-CCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGT 4738 Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 |||||||||||||||||| ||||||||||| ||||||||| || | || |||| Sbjct 4737 TGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACACGGGCCCT 4682 Score = 167 bits (184), Expect = 7e-39 Identities = 175/229 (76%), Gaps = 12/229 (5%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct 5521 TACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCAT 5462 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||| | |||||||||| ||||||| | ||| Sbjct 5461 GTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACA---TATGA------ 5411 Query 121 TAGAGATAGAGGTTTCCCCTTCGGG--GGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 | | | | | ||| |||| | || ||||||| ||||||| ||||||| Sbjct 5410 -ACAACAAAACCTGTCCTTAACGGGATGTACTTTCATACAGGTGTTGCATGGCTGTCGTC 5352 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 |||||||||||||||||||| ||| |||||| |||||||| |||||| Sbjct 5351 AGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTTTAACGAGCGAAACCCT 5303 >seq34440 Length=3381 Score = 82.4 bits (90), Expect = 2e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 158 AGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGA 217 ||||| ||||||| ||||||||||||||||||||| ||||| ||| |||||| ||||| Sbjct 2575 AGGTGTTGCATGGCTGTCGTCAGCTCGTGTCGTGAAATGTTTGGTCAAGTCCTTTAACGA 2516 Query 218 GCGCAACCCT 227 || |||||| Sbjct 2515 GCAAAACCCT 2506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1501129224960