Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq618 284 2e-74 seq3688 248 1e-63 seq137676 114 2e-23 >seq618 Length=12052 Score = 284 bits (314), Expect = 2e-74 Identities = 220/259 (85%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1662 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1603 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | || ||| | ||||||||||||||||| ||| Sbjct 1602 CCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCC 1543 Query 122 ACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | ||| || |||| |||||||| | ||||||||||||||| ||||||| Sbjct 1542 GCGGAGGGATACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 1483 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1482 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCTCG 1423 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| ||| |||||| Sbjct 1422 AAAGAGCTCTCAGTCTGTC 1404 Score = 118 bits (130), Expect = 2e-24 Identities = 74/80 (93%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 9842 AGGTCTCGTCGTTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 9783 Query 217 GCACCACCACCCATAGAATC 236 ||||||||||||||| |||| Sbjct 9782 GCACCACCACCCATAAAATC 9763 >seq3688 Length=5029 Score = 248 bits (274), Expect = 1e-63 Identities = 212/258 (82%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 4773 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT-TAAGGGCATCATAGA 4831 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||| || ||| ||||||||||||||||| || Sbjct 4832 CCTGTTATTGCCTCAAACTTCCACGACCTAAAAGGATGTAGTCCCTCTAAGAAGCTGGCT 4891 Query 122 ACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | ||| || |||| |||||| | ||||||||| ||||||| ||||||| Sbjct 4892 GCGGAGGGATACCTCCGCATAGCTAGTTAGCAAGCTAAGGTCTCATTCGTTAACGGAATT 4951 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 4952 AATCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCTATAGAATATCG 5011 Query 240 AAAGAGCTATCAATCTGT 257 |||||||| ||| ||||| Sbjct 5012 AAAGAGCTCTCAGTCTGT 5029 >seq137676 Length=979 Score = 114 bits (126), Expect = 2e-23 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 24 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 83 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 902 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 961 Query 84 ATTGGCTGGAAGCCAATA 101 || | || || | | ||| Sbjct 962 ATGGCCTAGACGGCCATA 979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795326628156