Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq21829 107 2e-21 seq3962 107 2e-21 seq26345 80.6 3e-13 >seq21829 Length=24115 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 21448 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 21389 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 21388 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 21329 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 21328 GACAAGGAATTTCGCTACCTTAGGACAGTTA 21298 >seq3962 Length=38492 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 34111 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 34052 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 34051 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 33993 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 33992 ACAAGGAATTTCGCTACCTTAGGACCGTTA 33963 >seq26345 Length=3026 Score = 80.6 bits (88), Expect = 3e-13 Identities = 51/54 (94%), Gaps = 1/54 (2%) Strand=Plus/Plus Query 120 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 1890 TTCGTGCGGGTCGGAACTTACCCGATAAGGAATTTCGCTACCTTAGG-CCGTTA 1942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546188166324