Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq65691 322 2e-85 seq3962 264 4e-68 seq94189 212 2e-52 seq21829 145 3e-32 >seq65691 Length=666 Score = 322 bits (356), Expect = 2e-85 Identities = 382/511 (75%), Gaps = 15/511 (3%) Strand=Plus/Plus Query 93 CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAA---ACACGCGACGCTGCACCTAAAT 149 |||||| ||||||||||||||||| ||| | | | ||||| | |||| |||||||| Sbjct 1 CCCTAGCCCATCCAGTGCTCTACC-CCGCAAGGTATTCACACGAGGCGCT--ACCTAAAT 57 Query 150 GCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGG 209 ||||| |||||||||||||| | |||||||||||||||||||||||| ||||| | Sbjct 58 AGCTTTCGCGGAGAACCAGCTATTTCCGAGTTTGATTGGCCTTTCACCCCTAGCCACACG 117 Query 210 TCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTT 269 |||||| |||||||| ||||||| |||||| ||| |||||| ||| Sbjct 118 TCATCCAAGACCTTTTCAACGGGCACTGGTTCGGACCTCCAGTGGGTGTTACCCCACCTT 177 Query 270 CAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCT 329 || ||||| ||||| ||||||||| | ||||||||| | | ||| | ||||||| Sbjct 178 CATCCTGCACATGGCTAGATCACTCGGTTTCGGGTCTAAAGCCACGAACTGA-ACGCCCT 236 Query 330 ATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAA 389 ||| |||||||||||||| || |||| || ||| |||| || || | ||| || Sbjct 237 GTTCAGACTCGCTTTCGCTGCGCCTACACCTACCGGCTTAAGCTTGCT-CGTAACTTTAA 295 Query 390 CTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCT 449 |||| | | |||| | ||||||| |||| ||||| | || | ||| |||| Sbjct 296 GTCGCTGACCCATTATACAAAAGGTACGCGGTCACTCAGGACGAAC------CTTGAGCT 349 Query 450 CCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCA-GGGGTACTTT 508 || || | ||||| ||| ||||||||| ||| ||||||||||| | ||||| |||| Sbjct 350 CCCACTGTTTGTAAGCATCCGGTTTCAGGAACTGTTTCACTCCCCTCGTCGGGGTGCTTT 409 Query 509 TCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACG 568 |||||||||||||||||||||||| ||||||||||| | ||||||| |||||||| | Sbjct 410 TCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCGCTGAGGAGTACTTAGGCTTGGAG 469 Query 569 GGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||| ||| |||| || |||||| Sbjct 470 GGTGGTCCCCCCATGTTCAGACAGGATTTCA 500 >seq3962 Length=38492 Score = 264 bits (292), Expect = 4e-68 Identities = 344/470 (73%), Gaps = 28/470 (6%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 32878 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 32819 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 32818 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 32759 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC--TTGATCGTG 314 | |||| |||||| |||| |||||||||||||| | |||||||| | | ||| Sbjct 32758 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAGGCAGTG 32699 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || | ||||||| |||||||||||||||||||| || || |||| Sbjct 32698 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 32646 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 32645 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAG 32591 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 ||| ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 32590 CCCT----GGCCC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 32540 Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||| | Sbjct 32539 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 32480 Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 32479 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 32430 >seq94189 Length=471 Score = 212 bits (234), Expect = 2e-52 Identities = 345/486 (71%), Gaps = 27/486 (6%) Strand=Plus/Minus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCT 111 ||||||||||||| | ||||||| ||| |||||||| || || ||| Sbjct 470 GGCATTCGGAGTTCATCAGGATTCGGTAGGCTCTGACACCCCCTAGTCCTATTGGTAGCT 411 Query 112 CTACCTCCGGGAAGA--AACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGC 169 |||||||| | || ||| | |||||||| |||| ||| |||||||||||| || ||| Sbjct 410 CTACCTCCAGCAAACCTAAC-CACGACGCTGTACCTCAATACATTTCGGGGAGTACGAGC 352 Query 170 TATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAAC 229 ||| | |||||||||||||||||||||||| || || ||||||| |||||||| Sbjct 351 TATTTCCTAGTTTGATTGGCCTTTCACCCCTACCCTCAAGTCATCCAAATCCTTTTCAAC 292 Query 230 CTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGAT 289 || ||||||| ||||||| || ||||| ||||| ||||| || || ||| | Sbjct 291 GGAAACTGGTTCGGACCTCCACAGCGTGTTACCGCTCCTTCATCCTGCTCAAGGGTAGCT 232 Query 290 CACTTCGCTTCGGGTCTTGATCGTGCCACTCA-TA--CGCCCTATTCGGACTCGCTTTCG 346 |||| | |||| |||| | | ||||| | || |||||||||| |||||||||||| Sbjct 231 CACTAGGTTTCGCGTCT--ACC--CCCACTGACTACGCGCCCTATTCAGACTCGCTTTCG 176 Query 347 CTACGGCTAC----CCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCAT 402 || ||||| | || | ||||||| || | | |||||| |||||||| Sbjct 175 CTGCGGCTGCGTGATTCAAATCACTTAACCTTGCCAGTGAGGAGTAACTCGTAGGCTCAT 116 Query 403 TCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTA 462 | | |||||||||||| ||| |||| | | | ||| || | ||||| Sbjct 115 TATGCAAAAGGCACGCTATCA--GGGTATTGACA--------CCCCTCTAACTGCTTGTA 66 Query 463 GGCACATGGTTTCAGGTACTATTTCACTCC-CCGCCAGGGGTACTTTTCACCTTTCCCTC 521 ||||| |||||||||| || ||||||||| | | | ||| ||||||||||||||||| Sbjct 65 AGCACACGGTTTCAGGTTCT-TTTCACTCCGCTATCCGCGGTTCTTTTCACCTTTCCCTC 7 Query 522 ACGGTA 527 |||||| Sbjct 6 ACGGTA 1 >seq21829 Length=24115 Score = 145 bits (160), Expect = 3e-32 Identities = 186/255 (73%), Gaps = 5/255 (2%) Strand=Plus/Minus Query 56 ATTCGGAGTTTGGTTGATTTCGGTAAGCT----TGTGGGCCCCCTAGACCATCCAGTGCT 111 ||||||||||| ||| | |||||| || || | |||||| |||| |||||| Sbjct 20125 ATTCGGAGTTTCCTTGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTGAGTGCT 20066 Query 112 CTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTA 171 ||||||| || | ||| ||||| || |||| |||||| ||| ||||||||| Sbjct 20065 CTACCTCGGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTA 20006 Query 172 TCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCT 231 | | | ||| ||||||||||||||||| ||||| ||||||||| | ||| | || | Sbjct 20005 TATCCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACAT 19946 Query 232 AAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGCGCTTCAACCTGCCCATGGATAGATC 290 | ||||||||||||||||| | | ||| | | ||||||||||| ||||| |||||| Sbjct 19945 ACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATC 19886 Query 291 ACTTCGCTTCGGGTC 305 | | |||||||| Sbjct 19885 GATCGGTTTCGGGTC 19871 Score = 109 bits (120), Expect = 2e-21 Identities = 104/132 (79%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACT--ATTTCACTCCCCGCCAGGGGTAC 505 || |||| |||||| ||| | | |||||| || ||| ||||||| |||| | Sbjct 19704 CTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTC 19645 Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 ||||||||||||||||||||||||||| |||||||||||| |||| || ||||||||| Sbjct 19644 TTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTA 19585 Query 566 ACGGGTGGTCCC 577 |||||||||| Sbjct 19584 GAGGGTGGTCCC 19573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1814130637824