Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq65691 322 2e-85
seq3962 264 4e-68
seq94189 212 2e-52
seq21829 145 3e-32
>seq65691
Length=666
Score = 322 bits (356), Expect = 2e-85
Identities = 382/511 (75%), Gaps = 15/511 (3%)
Strand=Plus/Plus
Query 93 CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAA---ACACGCGACGCTGCACCTAAAT 149
|||||| ||||||||||||||||| ||| | | | ||||| | |||| ||||||||
Sbjct 1 CCCTAGCCCATCCAGTGCTCTACC-CCGCAAGGTATTCACACGAGGCGCT--ACCTAAAT 57
Query 150 GCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGG 209
||||| |||||||||||||| | |||||||||||||||||||||||| ||||| |
Sbjct 58 AGCTTTCGCGGAGAACCAGCTATTTCCGAGTTTGATTGGCCTTTCACCCCTAGCCACACG 117
Query 210 TCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTT 269
|||||| |||||||| ||||||| |||||| ||| |||||| |||
Sbjct 118 TCATCCAAGACCTTTTCAACGGGCACTGGTTCGGACCTCCAGTGGGTGTTACCCCACCTT 177
Query 270 CAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCT 329
|| ||||| ||||| ||||||||| | ||||||||| | | ||| | |||||||
Sbjct 178 CATCCTGCACATGGCTAGATCACTCGGTTTCGGGTCTAAAGCCACGAACTGA-ACGCCCT 236
Query 330 ATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAA 389
||| |||||||||||||| || |||| || ||| |||| || || | ||| ||
Sbjct 237 GTTCAGACTCGCTTTCGCTGCGCCTACACCTACCGGCTTAAGCTTGCT-CGTAACTTTAA 295
Query 390 CTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCT 449
|||| | | |||| | ||||||| |||| ||||| | || | ||| ||||
Sbjct 296 GTCGCTGACCCATTATACAAAAGGTACGCGGTCACTCAGGACGAAC------CTTGAGCT 349
Query 450 CCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCA-GGGGTACTTT 508
|| || | ||||| ||| ||||||||| ||| ||||||||||| | ||||| ||||
Sbjct 350 CCCACTGTTTGTAAGCATCCGGTTTCAGGAACTGTTTCACTCCCCTCGTCGGGGTGCTTT 409
Query 509 TCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACG 568
|||||||||||||||||||||||| ||||||||||| | ||||||| |||||||| |
Sbjct 410 TCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCGCTGAGGAGTACTTAGGCTTGGAG 469
Query 569 GGTGGTCCCGCCAGATTCACACGAAATTTCA 599
||||||||| ||| |||| || ||||||
Sbjct 470 GGTGGTCCCCCCATGTTCAGACAGGATTTCA 500
>seq3962
Length=38492
Score = 264 bits (292), Expect = 4e-68
Identities = 344/470 (73%), Gaps = 28/470 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 32878 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 32819
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| ||
Sbjct 32818 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 32759
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC--TTGATCGTG 314
| |||| |||||| |||| |||||||||||||| | |||||||| | | |||
Sbjct 32758 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAGGCAGTG 32699
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370
|| | ||||||| |||||||||||||||||||| || || ||||
Sbjct 32698 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 32646
Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429
|| || ||| | | | |||| |||||||||||||| |||||||| |||| |
Sbjct 32645 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAG 32591
Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489
||| ||| | |||| || | ||| || | ||||||| || |||||||||
Sbjct 32590 CCCT----GGCCC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 32540
Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549
|||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||| |
Sbjct 32539 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 32480
Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 32479 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 32430
>seq94189
Length=471
Score = 212 bits (234), Expect = 2e-52
Identities = 345/486 (71%), Gaps = 27/486 (6%)
Strand=Plus/Minus
Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCT 111
||||||||||||| | ||||||| ||| |||||||| || || |||
Sbjct 470 GGCATTCGGAGTTCATCAGGATTCGGTAGGCTCTGACACCCCCTAGTCCTATTGGTAGCT 411
Query 112 CTACCTCCGGGAAGA--AACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGC 169
|||||||| | || ||| | |||||||| |||| ||| |||||||||||| || |||
Sbjct 410 CTACCTCCAGCAAACCTAAC-CACGACGCTGTACCTCAATACATTTCGGGGAGTACGAGC 352
Query 170 TATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAAC 229
||| | |||||||||||||||||||||||| || || ||||||| ||||||||
Sbjct 351 TATTTCCTAGTTTGATTGGCCTTTCACCCCTACCCTCAAGTCATCCAAATCCTTTTCAAC 292
Query 230 CTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGAT 289
|| ||||||| ||||||| || ||||| ||||| ||||| || || ||| |
Sbjct 291 GGAAACTGGTTCGGACCTCCACAGCGTGTTACCGCTCCTTCATCCTGCTCAAGGGTAGCT 232
Query 290 CACTTCGCTTCGGGTCTTGATCGTGCCACTCA-TA--CGCCCTATTCGGACTCGCTTTCG 346
|||| | |||| |||| | | ||||| | || |||||||||| ||||||||||||
Sbjct 231 CACTAGGTTTCGCGTCT--ACC--CCCACTGACTACGCGCCCTATTCAGACTCGCTTTCG 176
Query 347 CTACGGCTAC----CCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCAT 402
|| ||||| | || | ||||||| || | | |||||| ||||||||
Sbjct 175 CTGCGGCTGCGTGATTCAAATCACTTAACCTTGCCAGTGAGGAGTAACTCGTAGGCTCAT 116
Query 403 TCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTA 462
| | |||||||||||| ||| |||| | | | ||| || | |||||
Sbjct 115 TATGCAAAAGGCACGCTATCA--GGGTATTGACA--------CCCCTCTAACTGCTTGTA 66
Query 463 GGCACATGGTTTCAGGTACTATTTCACTCC-CCGCCAGGGGTACTTTTCACCTTTCCCTC 521
||||| |||||||||| || ||||||||| | | | ||| |||||||||||||||||
Sbjct 65 AGCACACGGTTTCAGGTTCT-TTTCACTCCGCTATCCGCGGTTCTTTTCACCTTTCCCTC 7
Query 522 ACGGTA 527
||||||
Sbjct 6 ACGGTA 1
>seq21829
Length=24115
Score = 145 bits (160), Expect = 3e-32
Identities = 186/255 (73%), Gaps = 5/255 (2%)
Strand=Plus/Minus
Query 56 ATTCGGAGTTTGGTTGATTTCGGTAAGCT----TGTGGGCCCCCTAGACCATCCAGTGCT 111
||||||||||| ||| | |||||| || || | |||||| |||| ||||||
Sbjct 20125 ATTCGGAGTTTCCTTGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTGAGTGCT 20066
Query 112 CTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTA 171
||||||| || | ||| ||||| || |||| |||||| ||| |||||||||
Sbjct 20065 CTACCTCGGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTA 20006
Query 172 TCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCT 231
| | | ||| ||||||||||||||||| ||||| ||||||||| | ||| | || |
Sbjct 20005 TATCCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACAT 19946
Query 232 AAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGCGCTTCAACCTGCCCATGGATAGATC 290
| ||||||||||||||||| | | ||| | | ||||||||||| ||||| ||||||
Sbjct 19945 ACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATC 19886
Query 291 ACTTCGCTTCGGGTC 305
| | ||||||||
Sbjct 19885 GATCGGTTTCGGGTC 19871
Score = 109 bits (120), Expect = 2e-21
Identities = 104/132 (79%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACT--ATTTCACTCCCCGCCAGGGGTAC 505
|| |||| |||||| ||| | | |||||| || ||| ||||||| |||| |
Sbjct 19704 CTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTC 19645
Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565
||||||||||||||||||||||||||| |||||||||||| |||| || |||||||||
Sbjct 19644 TTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTA 19585
Query 566 ACGGGTGGTCCC 577
||||||||||
Sbjct 19584 GAGGGTGGTCCC 19573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1814130637824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |