Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq3962 215 1e-53 seq5414 132 1e-28 seq23440 118 2e-24 seq167522 100 6e-19 >seq3962 Length=38492 Score = 215 bits (238), Expect = 1e-53 Identities = 232/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 28470 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 28411 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 28410 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 28351 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||| ||||| || | Sbjct 28350 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCAAGCCCCTCCTCGG 28291 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 28290 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 28247 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 28246 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 28188 Query 300 CCACT 304 ||||| Sbjct 28187 CCACT 28183 >seq5414 Length=36579 Score = 132 bits (146), Expect = 1e-28 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 5987 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 6046 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | || || || || |||| ||| | || Sbjct 6047 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCGTCCGAAAAGACCAGCTAAGCATCATTGG 6106 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 6107 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 6139 >seq23440 Length=1576 Score = 118 bits (130), Expect = 2e-24 Identities = 89/105 (85%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||| ||||| | Sbjct 1083 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCCACTGCTGCCCCCCGTGG 1142 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTC 105 ||||||||||||||||||||||||| |||||| | ||| |||||| Sbjct 1143 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTC 1187 >seq167522 Length=1668 Score = 100 bits (110), Expect = 6e-19 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||| | |||| ||||||||| || || ||||| ||||||||| ||||| Sbjct 515 GGCATTGCTCCGTCAAGCTTTCGCCCATTGTGGAAAATTCCCCATTGCTGCCTCTCGTAG 456 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTC 103 ||||||| | |||| |||||||||| |||||| | ||| |||| Sbjct 455 GAGTCTGTGTCGTGCCTCAGTCCCAGTGTGGCTGATCATCCTC 413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 996494294016