Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq618 118 1e-24 seq153850 104 2e-20 >seq618 Length=12052 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 913 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 972 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| || ||||||| Sbjct 973 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 1030 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| || || ||| | ||||| || |||| |||||||||||||||||||| Sbjct 1031 TTAACAGGGACAGCCGTGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 1090 Query 190 T 190 | Sbjct 1091 T 1091 >seq153850 Length=5434 Score = 104 bits (114), Expect = 2e-20 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGT-TCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| || Sbjct 420 CTGTTACTTTGAAGAAATTAGAGTGGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCA 361 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||| |||| | |||||| | |||| ||||| || || | ||| || |||||| Sbjct 360 TGGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATG 303 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || || | ||| | || ||| | ||||||| | |||| ||||||||||||||||||| Sbjct 302 ATTAACAGGGACAC-CGTGGGCATTCGTATTCA-TAGTCACAGGTGAAATTCTTGGATTT 245 Query 189 AT 190 || Sbjct 244 AT 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511053255040