Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq618 118 1e-24
seq153850 104 2e-20
>seq618
Length=12052
Score = 118 bits (130), Expect = 1e-24
Identities = 137/181 (76%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 913 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 972
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || || | ||| || |||||||
Sbjct 973 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 1030
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| || || ||| | ||||| || |||| ||||||||||||||||||||
Sbjct 1031 TTAACAGGGACAGCCGTGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 1090
Query 190 T 190
|
Sbjct 1091 T 1091
>seq153850
Length=5434
Score = 104 bits (114), Expect = 2e-20
Identities = 137/182 (75%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGT-TCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||
Sbjct 420 CTGTTACTTTGAAGAAATTAGAGTGGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCA 361
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
||| |||| | |||||| | |||| ||||| || || | ||| || ||||||
Sbjct 360 TGGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATG 303
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| || | ||| | || ||| | ||||||| | |||| |||||||||||||||||||
Sbjct 302 ATTAACAGGGACAC-CGTGGGCATTCGTATTCA-TAGTCACAGGTGAAATTCTTGGATTT 245
Query 189 AT 190
||
Sbjct 244 AT 243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511053255040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |