Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq3962 273 5e-71
seq5414 226 7e-57
>seq3962
Length=38492
Score = 273 bits (302), Expect = 5e-71
Identities = 305/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 28536 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 28595
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || ||||||| | || |||
Sbjct 28596 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 28655
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 28656 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 28715
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| |||||||||||||||||| || | | |||||||| ||||||
Sbjct 28716 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAA 28775
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| ||||||| || |||||
Sbjct 28776 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 28835
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363
|||||||| ||||||| ||||||||||||| |||||||| | | | ||| || |
Sbjct 28836 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCC 28894
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 28895 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 28939
>seq5414
Length=36579
Score = 226 bits (250), Expect = 7e-57
Identities = 256/340 (75%), Gaps = 10/340 (3%)
Strand=Plus/Minus
Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61
||| ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||
Sbjct 5916 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCA 5857
Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121
|| ||| | |||||| ||||||||||||||| |||||| ||| | || | |||
Sbjct 5856 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTG 5797
Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177
|||| | | | || | | ||| |||| | ||||| | || || |||||
Sbjct 5796 AAAGTC---GCCAAAAACTGGCGGAATGCTCTCGAAACCAATTCA---CTTGAGTGAGAC 5743
Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237
|| || ||||||||| | |||||| |||||||| || |||| | | |||||| |||
Sbjct 5742 AGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAA 5683
Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297
|||||||| ||| |||| || ||| ||| || ||||||| |||||||| ||
Sbjct 5682 AAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAA 5623
Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337
||||||||||||||||||||||||| ||||||||||||||
Sbjct 5622 CAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGA 5583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1200903379968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |