Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq65691 217 5e-54
seq21829 183 1e-43
seq3962 179 1e-42
seq94189 174 5e-41
>seq65691
Length=666
Score = 217 bits (240), Expect = 5e-54
Identities = 198/247 (80%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| |||||||||| |||| ||| | ||||||||||||| ||||||||| ||||
Sbjct 247 CGAGTCTGAACAGGGCGTTCAGTTCGTGGCTTTAGACCCGAAACCGAGTGATCTAGCCAT 188
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
| ||||||||||||| |||||||| | ||||||||||||||| ||||||||
Sbjct 187 GTGCAGGATGAAGGTGGGGTAACACCCACTGGAGGTCCGAACCAGTGCCCGTTGAAAAGG 128
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
| |||||| ||||| |||||||||||||| || |||||| |||||||||||||||||
Sbjct 127 TCTTGGATGACGTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTGGTTCTC 68
Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGT-ATCACCATCGGGGGTAGAGCACTGTTATG 239
||||| |||||||||||| ||||| || | ||| | |||||||||||||| |
Sbjct 67 CGCGAAAGCTATTTAGGTAGCGCCTCGTGTGAATACCTTGCGGGGTAGAGCACTGGATGG 8
Query 240 GCTAGGG 246
|||||||
Sbjct 7 GCTAGGG 1
>seq21829
Length=24115
Score = 183 bits (202), Expect = 1e-43
Identities = 323/461 (70%), Gaps = 26/461 (6%)
Strand=Plus/Plus
Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93
||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| ||||
Sbjct 19871 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 19930
Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153
|| |||||||||| |||| | ||||| |||||||| ||||| ||||||||||||||
Sbjct 19931 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 19990
Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213
|| ||| | ||| |||||||||| || ||||| |||||| |||| || | | ||
Sbjct 19991 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 20048
Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267
| || | | ||||||||||| |||||||| | |||| || |||||||| |
Sbjct 20049 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 20108
Query 268 CATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321
| | ||||||||||| | || ||| || ||| || || ||||||
Sbjct 20109 CCAAGGAAACTCCGAATACAGGCCTAGATCGTTTGTAC----AGACAGACTTTTTGGGTG 20164
Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381
||||| ||| ||||||| || | || || | ||||||| ||| || |
Sbjct 20165 CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 20224
Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439
|| ||| || || |||| |||| || | |||| | |||| || |||||||||||
Sbjct 20225 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 20280
Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
||||| || ||| |||| |||||| |||||||| ||| ||
Sbjct 20281 AGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 20320
>seq3962
Length=38492
Score = 179 bits (198), Expect = 1e-42
Identities = 395/583 (68%), Gaps = 38/583 (7%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| | ||||| | ||| ||| | | |||||||| | |||||||| |||||
Sbjct 32677 CGAGTCTTCATAGGGCAATTGTCACTGCCTATGGACCCGAACCTGGGTGATCTATCCATG 32736
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121
||||||||||| | ||| | || |||||||||||||| ||| |||||||| |||
Sbjct 32737 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 32796
Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181
|| ||||||| ||||| ||||||||||| || | | ||| || ||||||||||||
Sbjct 32797 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 32856
Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236
|||||| || ||| || ||| | || |||| |||||| |||||||||
Sbjct 32857 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 32911
Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287
|| ||| | | ||| ||||||| | |||||||| |||| |
Sbjct 32912 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 32969
Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336
| ||| | || | || |||||| ||||| | |||| | | | |
Sbjct 32970 CCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 33029
Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396
|||||| || | ||||| | ||||||||||||| |||||| ||| ||| | | ||
Sbjct 33030 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGATCGCTCAGTGATA--AA 33087
Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456
|| || | ||| ||||||| |||| ||| || | |||||||||| | || |||||
Sbjct 33088 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 33146
Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516
|||||||| |||||||| ||||| || ||| || || | |||| |||| |
Sbjct 33147 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 33205
Query 517 CTACCGAAGCAGTGGGAT-CATTTATATGATCGGTAGGGGAGC 558
|| ||||||| ||||||| | ||| ||||||||||||||
Sbjct 33206 CTGCCGAAGCTGTGGGATGTAAAAATA-CATCGGTAGGGGAGC 33247
>seq94189
Length=471
Score = 174 bits (192), Expect = 5e-41
Identities = 161/201 (80%), Gaps = 5/201 (2%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| ||| |||||| |||| |||| |||||| ||||||| ||||| |||||| |
Sbjct 182 CGAGTCTGAATAGGGCGCGTAGTCAGTGGGGGTAGACGCGAAACCTAGTGAGCTACCCTT 241
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA-- 118
| ||||||||||| |||||||||||| |||||||||||||| | ||||||||
Sbjct 242 GAGCAGGATGAAGGAGCGGTAACACGCTGTGGAGGTCCGAACCAGTTTCCGTTGAAAAGG 301
Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178
||| |||||| || ||||||||||||||||| || |||||| |||||||||| || |
Sbjct 302 ATT--TGGATGACTTGAGGGTAGGGGTGAAAGGCCAATCAAACTAGGAAATAGCTCGTAC 359
Query 179 TCTCCGAAAACTATTTAGGTA 199
|| |||||| |||| |||||
Sbjct 360 TCCCCGAAATGTATTGAGGTA 380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1686374959104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |