Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq618 711 0.0 seq112909 147 7e-33 seq3688 145 2e-32 seq21829 75.2 4e-11 >seq618 Length=12052 Score = 711 bits (788), Expect = 0.0 Identities = 481/533 (90%), Gaps = 7/533 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 5299 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 5240 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5239 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 5180 Query 127 GGCCCGC-GAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCA 182 ||||||| |||| | |||| | | ||| || || || | || | ||||| |||| Sbjct 5179 GGCCCGCCGAAGCGGGCCTTGGGTCTAAAAAGAGG--GGCGATGCCCCGCTTCCGATTCA 5122 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||| |||| ||||||||| Sbjct 5121 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCCA 5063 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5062 CTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 5003 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 5002 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 4943 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4942 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 4883 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4882 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 4823 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 4822 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 4770 >seq112909 Length=1768 Score = 147 bits (162), Expect = 7e-33 Identities = 81/81 (100%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 609 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 668 Query 508 TGGGCAGAAATCACATTGCGT 528 ||||||||||||||||||||| Sbjct 669 TGGGCAGAAATCACATTGCGT 689 >seq3688 Length=5029 Score = 145 bits (160), Expect = 2e-32 Identities = 112/132 (85%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||| ||||||| || |||| |||| | |||||||||||||| |||| Sbjct 3977 CTTCTGTTCCACACGAGATTTTTGCTCTCGTTGAGCTCATCTTAGGACACCTGCATTATC 4036 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 4037 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCTGCCCGGATC 4096 Query 127 GGCCCG-CGAAG 137 | |||| ||||| Sbjct 4097 GACCCGCCGAAG 4108 >seq21829 Length=24115 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 21375 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 21316 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||| || ||| | ||||||| |||||||||||| Sbjct 21315 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 21277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1632078795648