Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq618 711 0.0
seq112909 147 7e-33
seq3688 145 2e-32
seq21829 75.2 4e-11
>seq618
Length=12052
Score = 711 bits (788), Expect = 0.0
Identities = 481/533 (90%), Gaps = 7/533 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 5299 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 5240
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 5239 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 5180
Query 127 GGCCCGC-GAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCA 182
||||||| |||| | |||| | | ||| || || || | || | ||||| ||||
Sbjct 5179 GGCCCGCCGAAGCGGGCCTTGGGTCTAAAAAGAGG--GGCGATGCCCCGCTTCCGATTCA 5122
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242
|| ||||||||| |||| ||| ||||||||||||||||| |||| |||||||||
Sbjct 5121 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCCA 5063
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5062 CTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 5003
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 5002 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 4943
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4942 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 4883
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4882 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 4823
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 4822 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 4770
>seq112909
Length=1768
Score = 147 bits (162), Expect = 7e-33
Identities = 81/81 (100%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 668
Query 508 TGGGCAGAAATCACATTGCGT 528
|||||||||||||||||||||
Sbjct 669 TGGGCAGAAATCACATTGCGT 689
>seq3688
Length=5029
Score = 145 bits (160), Expect = 2e-32
Identities = 112/132 (85%), Gaps = 1/132 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| ||||||| || |||| |||| | |||||||||||||| ||||
Sbjct 3977 CTTCTGTTCCACACGAGATTTTTGCTCTCGTTGAGCTCATCTTAGGACACCTGCATTATC 4036
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 4037 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCTGCCCGGATC 4096
Query 127 GGCCCG-CGAAG 137
| |||| |||||
Sbjct 4097 GACCCGCCGAAG 4108
>seq21829
Length=24115
Score = 75.2 bits (82), Expect = 4e-11
Identities = 76/99 (77%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 21375 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 21316
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467
||||||||| || ||| | ||||||| ||||||||||||
Sbjct 21315 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 21277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1632078795648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |