Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq176413 293 4e-77
seq618 107 3e-21
seq3688 89.7 8e-16
>seq176413
Length=469
Score = 293 bits (324), Expect = 4e-77
Identities = 235/278 (85%), Gaps = 4/278 (1%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 381 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 324
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct 323 GCCGCGAAGCTACCATCTGCTGGATAATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 264
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||||| |||| ||||| |||| ||||| |||||||||||||||||||||||| ||
Sbjct 263 GAACGGGACGATTTTCTCCAGCACGTCGTACGAGGATACGAATAGGCTTCGGCCCCGGAC 204
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
||||||||||| ||| || || |||| || | | | | |||||||| |||
Sbjct 203 CTTAGCAGGCC-ATAACTCCTCTCTCGTAGAAGTCGGGAGAGGT-AATTGGCGGATAGCA 146
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| || |||| ||||| |||||||||||||||||
Sbjct 145 ATTTGACAGCGCGCTGGGATGAATCCTTTGCAGACGAC 108
>seq618
Length=12052
Score = 107 bits (118), Expect = 3e-21
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||| | ||||||| | ||| || ||| || ||||
Sbjct 5622 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 5679
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | || ||||||||| |||||||||||||||||||||||| || |
Sbjct 5680 GGCGCGAAGCTACCGTGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGGCTA 5739
Query 121 GAA 123
|||
Sbjct 5740 GAA 5742
>seq3688
Length=5029
Score = 89.7 bits (98), Expect = 8e-16
Identities = 95/123 (77%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| | ||||
Sbjct 3666 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAATCCAGT 3609
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| || ||||||||| | || ||||||||| |||||| |||||||||||||||| || |
Sbjct 3608 GGCGTGAAGCTACCGTGTGTTGGATTATGATTGAACGTCTCTAAGTCAGAATCCTGGCTA 3549
Query 121 GAA 123
|||
Sbjct 3548 GAA 3546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 817685208064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |