Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq618 609 7e-172
seq41845 315 2e-83
seq22086 300 5e-79
seq22084 116 1e-23
seq177314 75.2 3e-11
>seq618
Length=12052
Score = 609 bits (674), Expect = 7e-172
Identities = 448/513 (87%), Gaps = 13/513 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||
Sbjct 9028 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 8970
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8969 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 8910
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||
Sbjct 8909 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 8850
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 8849 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 8790
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC--- 294
| |||||| |||||| ||| |||||| |||||||| | | ||| | | || ||
Sbjct 8789 CGAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATC--GTAGCAACGGGCAGAGCCCG 8732
Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
|| | ||||||||||||||| || ||||||| ||||||||||||| | ||| |||||
Sbjct 8731 TGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 8672
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| |||||||||| |||| |||||| |||||| |||| ||||||||
Sbjct 8671 AGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGGTACCATCAAACAAACTATAACTGA 8613
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||
Sbjct 8612 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCT 8553
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 8552 TAATCTTTGAGACAAGCATATGACTACTGGCAG 8520
Score = 407 bits (450), Expect = 4e-111
Identities = 401/510 (79%), Gaps = 10/510 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||
Sbjct 689 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCC 631
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 630 TCCCGTGTCAGGATTGGGTAAT--GCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 573
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||
Sbjct 572 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTATAACCATGGTA 513
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||| || |||||||||||||||||||| |||||| ||||||| | | ||||| |
Sbjct 512 GGCGTATAACCTACCATCGAAAGTTGATAAGGCAGACATTTGAAAAATACGTCGCCAGTA 453
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGCGTT 297
| ||| | |||||| ||||||||| || ||||||| | |||||| | |
Sbjct 452 CTAAGACTGTGCGATCAACTAAGTTATTCAGAGTCACCAAAACACAAGCCGAAGCTTGAT 393
Query 298 GGTTTTTTATCTAATAAATACACCCCTTCCGAA--GT-CGGGGTTTTTAGCATGTATTAG 354
| |||| |||||||||| | | | |||| || || || | || ||| |||||||
Sbjct 392 TGGTTTTGGTCTAATAAATGCGCTCTTTCCAAAAGGTCCGAGACTTCGTGCACGTATTAG 333
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||||| |||| ||||||| |||| | || | ||||||| ||| |
Sbjct 332 CTCTAGAATTGCCACAGTTATCCGAGTAGATAACTAACGTTTAATAAACAGCGGCTGTTA 273
Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474
|| ||||||||||| | || || | | || || | | |||| |||||||||||||||
Sbjct 272 TACCGAGCCATTCGCGGCTTTACCATTTTGA-GGCATGTGCTTACACATGCATGGCTTAA 214
Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||| |||||||||||
Sbjct 213 TCTTTGAGACAAGCATATAACTACTGGCAG 184
>seq41845
Length=5927
Score = 315 bits (348), Expect = 2e-83
Identities = 276/336 (82%), Gaps = 12/336 (4%)
Strand=Plus/Plus
Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 3967 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATAATGCATCGCCG 4026
Query 238 GC-TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC 294
| | |||||| |||||| ||| |||||| |||||||| | | ||| | | || ||
Sbjct 4027 CCATGAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATC--GTAGCAACGGGTAGAGC 4084
Query 295 ----GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGT 349
|| | |||||| |||||||| || ||||||| |||| || |||| | ||| ||
Sbjct 4085 CCGTGTCGACCTTTTATGTAATAAATGCATCCCTTCCAAAAGTTGGAGTTTGTTGCACGT 4144
Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAAC 409
||||||| ||||||||| | |||||||| |||| |||||| |||||| |||| |||||
Sbjct 4145 ATTAGCTATAGAATTACTTCTGTTATCCAAGTAG-CAGGTACCATCAAACAAACTATAAC 4203
Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATG 468
| ||||||||||| |||||||||||||| || | ||| | | ||||||| |||||||||
Sbjct 4204 TAATTTAATGAGCTATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATG 4263
Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||| |||||||
Sbjct 4264 GCTTAATCTTTGAGACAAGCATATGACTTCTGGCAG 4299
>seq22086
Length=781
Score = 300 bits (332), Expect = 5e-79
Identities = 274/337 (81%), Gaps = 13/337 (4%)
Strand=Plus/Plus
Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
|||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 255 GTAGGCCACTATCCTACCATTGAAAGTTGATAGGGCAGAAATTTAAATGATGTGTCGCCG 314
Query 238 GCTC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGA--AGGGC 294
| | |||| |||||| ||| | |||| |||||||| | | ||| || || ||
Sbjct 315 ACACGAAGGTTGTGCGATCCGTCGATTTATCATGAATCATC--GTAGCAACGGGCAGAGC 372
Query 295 GTTGGTT----TTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCAT-G 348
|| ||||||||||||||| || || |||| ||||||||| || || ||| |
Sbjct 373 CCGTGTCCACCTTTTATCTAATAAATGCATCCATTCCAGAAGTCGGGTTTGTT-GCACCG 431
Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408
|||||| ||||||||| |||||||||| |||| ||||||| |||||| |||| ||||
Sbjct 432 TATTAGTCGTAGAATTACTACGGTTATCCGAGTAGCAAGGTACCATCAAAGAAACTATAA 491
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCAT 467
||||||||||||||||||||||||||||| ||| | | | ||||||||| ||||||||
Sbjct 492 CTGATTTAATGAGCCATTCGCAGTTTCACAGTACAAAAGAGTTTATACTTACACATGCAT 551
Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||
Sbjct 552 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 588
>seq22084
Length=7242
Score = 116 bits (128), Expect = 1e-23
Identities = 141/183 (77%), Gaps = 13/183 (7%)
Strand=Plus/Minus
Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
|||||||||||||||||||| ||||||| ||| ||||||||||| ||||| | ||||||
Sbjct 3385 GTAGGCCACTATCCTACCATTGAAAGTT-ATA-GGCAGAAATTTAAATGATGCGTCGCCG 3328
Query 238 GCTC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC 294
| | |||| | |||||| ||| |||||| |||||||| | | ||| | | || ||
Sbjct 3327 ACCCGAAGGTCGTGCGATCCGTCGAGTTATCATGAATCATC--GTAGCAACGGGCAGAGC 3270
Query 295 ----GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGT 349
|| ||||||||||| ||| || || |||| ||||||||||||| | ||||||
Sbjct 3269 CCGTGTCCACCTTTTATCTAAT-AATGCATCCATTCCAGAAGTCGGGGTTTGTTGCATGT 3211
Query 350 ATT 352
|||
Sbjct 3210 ATT 3208
>seq177314
Length=836
Score = 75.2 bits (82), Expect = 3e-11
Identities = 46/49 (94%), Gaps = 0/49 (0%)
Strand=Plus/Minus
Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441
|||||| |||| ||||||||||||||||||||||||||||||||| |||
Sbjct 57 ATCAAAGAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTA 9
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1507517008896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |