Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq618 609 7e-172 seq41845 315 2e-83 seq22086 300 5e-79 seq22084 116 1e-23 seq177314 75.2 3e-11 >seq618 Length=12052 Score = 609 bits (674), Expect = 7e-172 Identities = 448/513 (87%), Gaps = 13/513 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||| Sbjct 9028 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 8970 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8969 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 8910 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||| Sbjct 8909 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 8850 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 8849 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 8790 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC--- 294 | |||||| |||||| ||| |||||| |||||||| | | ||| | | || || Sbjct 8789 CGAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATC--GTAGCAACGGGCAGAGCCCG 8732 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352 || | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| Sbjct 8731 TGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 8672 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||||| |||||||||| |||| |||||| |||||| |||| |||||||| Sbjct 8671 AGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGGTACCATCAAACAAACTATAACTGA 8613 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471 ||||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||| Sbjct 8612 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCT 8553 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 8552 TAATCTTTGAGACAAGCATATGACTACTGGCAG 8520 Score = 407 bits (450), Expect = 4e-111 Identities = 401/510 (79%), Gaps = 10/510 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||| Sbjct 689 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCC 631 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 630 TCCCGTGTCAGGATTGGGTAAT--GCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 573 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||| Sbjct 572 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTATAACCATGGTA 513 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || |||||||||||||||||||| |||||| ||||||| | | ||||| | Sbjct 512 GGCGTATAACCTACCATCGAAAGTTGATAAGGCAGACATTTGAAAAATACGTCGCCAGTA 453 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGCGTT 297 | ||| | |||||| ||||||||| || ||||||| | |||||| | | Sbjct 452 CTAAGACTGTGCGATCAACTAAGTTATTCAGAGTCACCAAAACACAAGCCGAAGCTTGAT 393 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCCGAA--GT-CGGGGTTTTTAGCATGTATTAG 354 | |||| |||||||||| | | | |||| || || || | || ||| ||||||| Sbjct 392 TGGTTTTGGTCTAATAAATGCGCTCTTTCCAAAAGGTCCGAGACTTCGTGCACGTATTAG 333 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||| |||| ||||||| |||| | || | ||||||| ||| | Sbjct 332 CTCTAGAATTGCCACAGTTATCCGAGTAGATAACTAACGTTTAATAAACAGCGGCTGTTA 273 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 || ||||||||||| | || || | | || || | | |||| ||||||||||||||| Sbjct 272 TACCGAGCCATTCGCGGCTTTACCATTTTGA-GGCATGTGCTTACACATGCATGGCTTAA 214 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||| ||||||||||| Sbjct 213 TCTTTGAGACAAGCATATAACTACTGGCAG 184 >seq41845 Length=5927 Score = 315 bits (348), Expect = 2e-83 Identities = 276/336 (82%), Gaps = 12/336 (4%) Strand=Plus/Plus Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 3967 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATAATGCATCGCCG 4026 Query 238 GC-TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC 294 | | |||||| |||||| ||| |||||| |||||||| | | ||| | | || || Sbjct 4027 CCATGAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATC--GTAGCAACGGGTAGAGC 4084 Query 295 ----GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGT 349 || | |||||| |||||||| || ||||||| |||| || |||| | ||| || Sbjct 4085 CCGTGTCGACCTTTTATGTAATAAATGCATCCCTTCCAAAAGTTGGAGTTTGTTGCACGT 4144 Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAAC 409 ||||||| ||||||||| | |||||||| |||| |||||| |||||| |||| ||||| Sbjct 4145 ATTAGCTATAGAATTACTTCTGTTATCCAAGTAG-CAGGTACCATCAAACAAACTATAAC 4203 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATG 468 | ||||||||||| |||||||||||||| || | ||| | | ||||||| ||||||||| Sbjct 4204 TAATTTAATGAGCTATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATG 4263 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| ||||||| Sbjct 4264 GCTTAATCTTTGAGACAAGCATATGACTTCTGGCAG 4299 >seq22086 Length=781 Score = 300 bits (332), Expect = 5e-79 Identities = 274/337 (81%), Gaps = 13/337 (4%) Strand=Plus/Plus Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 255 GTAGGCCACTATCCTACCATTGAAAGTTGATAGGGCAGAAATTTAAATGATGTGTCGCCG 314 Query 238 GCTC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGA--AGGGC 294 | | |||| |||||| ||| | |||| |||||||| | | ||| || || || Sbjct 315 ACACGAAGGTTGTGCGATCCGTCGATTTATCATGAATCATC--GTAGCAACGGGCAGAGC 372 Query 295 GTTGGTT----TTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCAT-G 348 || ||||||||||||||| || || |||| ||||||||| || || ||| | Sbjct 373 CCGTGTCCACCTTTTATCTAATAAATGCATCCATTCCAGAAGTCGGGTTTGTT-GCACCG 431 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 |||||| ||||||||| |||||||||| |||| ||||||| |||||| |||| |||| Sbjct 432 TATTAGTCGTAGAATTACTACGGTTATCCGAGTAGCAAGGTACCATCAAAGAAACTATAA 491 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCAT 467 ||||||||||||||||||||||||||||| ||| | | | ||||||||| |||||||| Sbjct 492 CTGATTTAATGAGCCATTCGCAGTTTCACAGTACAAAAGAGTTTATACTTACACATGCAT 551 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||| Sbjct 552 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 588 >seq22084 Length=7242 Score = 116 bits (128), Expect = 1e-23 Identities = 141/183 (77%), Gaps = 13/183 (7%) Strand=Plus/Minus Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||||||||||||||||||| ||||||| ||| ||||||||||| ||||| | |||||| Sbjct 3385 GTAGGCCACTATCCTACCATTGAAAGTT-ATA-GGCAGAAATTTAAATGATGCGTCGCCG 3328 Query 238 GCTC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC 294 | | |||| | |||||| ||| |||||| |||||||| | | ||| | | || || Sbjct 3327 ACCCGAAGGTCGTGCGATCCGTCGAGTTATCATGAATCATC--GTAGCAACGGGCAGAGC 3270 Query 295 ----GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGT 349 || ||||||||||| ||| || || |||| ||||||||||||| | |||||| Sbjct 3269 CCGTGTCCACCTTTTATCTAAT-AATGCATCCATTCCAGAAGTCGGGGTTTGTTGCATGT 3211 Query 350 ATT 352 ||| Sbjct 3210 ATT 3208 >seq177314 Length=836 Score = 75.2 bits (82), Expect = 3e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 |||||| |||| ||||||||||||||||||||||||||||||||| ||| Sbjct 57 ATCAAAGAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTA 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1507517008896