Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq10646 437 2e-120
seq2566 430 2e-118
seq6951 426 3e-117
seq5649 423 3e-116
seq2225 387 3e-105
seq1165 233 4e-59
seq2030 192 1e-46
seq1871 183 6e-44
seq195 183 6e-44
seq9029 181 2e-43
seq650 179 7e-43
seq109 163 5e-38
seq8310 149 1e-33
seq8824 138 2e-30
seq23 118 2e-24
seq15020 107 4e-21
seq16640 93.3 8e-17
seq3842 89.7 9e-16
seq9274 84.2 4e-14
seq2690 82.4 1e-13
seq16444 73.4 7e-11
>seq10646
Length=592
Score = 437 bits (484), Expect = 2e-120
Identities = 262/274 (96%), Gaps = 1/274 (0%)
Strand=Plus/Plus
Query 45 TTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGC 104
||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 60 TTCACTGGGTGTGTCGGGGAACCAGGACTTTTACCTTGAAAAAATTAGAGTGTTCAAAGC 119
Query 105 AGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG 164
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 120 AGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACA-GAGGTTCTATTTTG 178
Query 165 TTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATT 224
||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 179 TTGGTTTCTAGGACCGCTGTAATGATTAATAGGGATAGTCGGGGGCGTCCGTATTCAATT 238
Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284
||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||
Sbjct 239 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACGAACTACTGCGAAAGCATTCGCCAAGG 298
Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||||||||||||||||||||||||||||
Sbjct 299 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 332
>seq2566
Length=12546
Score = 430 bits (476), Expect = 2e-118
Identities = 279/305 (91%), Gaps = 1/305 (0%)
Strand=Plus/Plus
Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74
||||||||| | || | | ||||| |||| |||||| ||| | ||| || |||||
Sbjct 12127 GGGCCTTTCTTCTTGAGAAATCGCATTTCCTTTACTGGGAGTGTTGAGGAATCAAGACTT 12186
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 12187 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATTTGCTCGAATACATTAGCATGGAA 12246
Query 135 TAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 12247 TAATAGAATAGGACGTTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 12306
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 12307 TAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 12366
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 12367 AGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 12426
Query 314 AGGGG 318
||||
Sbjct 12427 GGGGG 12431
>seq6951
Length=503
Score = 426 bits (472), Expect = 3e-117
Identities = 283/314 (90%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||| || | | |||||| | |||||| | ||||||||||||||| || | |||
Sbjct 75 TGGTTCGACTGAACCTTTCTTCTTGGGGAATCCTATGCCCTTCACTGGGCGTAGTGAGGA 134
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 135 ATCAAGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATTTGCTCGAATACAT 194
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 195 TAGCATGGAATAATGGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 254
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| | |||||||||| ||||||||||||||||||||
Sbjct 255 AATGATTAATAGGGACAGTCGGGGGCATTAGTATTCAATAGTCAGAGGTGAAATTCTTGG 314
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 315 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 374
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 375 ACGAAAGTTAGGGG 388
>seq5649
Length=13326
Score = 423 bits (468), Expect = 3e-116
Identities = 285/315 (90%), Gaps = 3/315 (1%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||| | | ||||||||||||||||| || |||||||||||||||| ||| |||||
Sbjct 9728 TGGTCCGTCTGAGCCTTTCCTTCTGGGGAGCCTCATGCCCTTCACTGGGCGTGATGGGGA 9787
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 9788 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATACAT 9847
Query 125 TAGCATGGAATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
|||||||||||||||||||||||||| || | |||||||||||||| |||| ||||
Sbjct 9848 TAGCATGGAATAATAGAATAGGACGTCGCTG-CCTATTTTGTTGGTTCATAGG-TAGCCG 9905
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 9906 TAATGATAAATAGGGACAGTCGGGGGTGTCAGTACTCAGGTGTCAGAGGTGAAATTCTTG 9965
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
|||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 9966 GATTACCTGATGACTAACTACTGCGAAAGCATTCACCAAGGATGTTTTCATTAATCAGTG 10025
Query 304 AACGAAAGTTAGGGG 318
|||||||||| ||||
Sbjct 10026 AACGAAAGTTGGGGG 10040
>seq2225
Length=7605
Score = 387 bits (428), Expect = 3e-105
Identities = 277/315 (88%), Gaps = 3/315 (1%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||| | ||||||||||||| ||| || |||||||||||||||| ||| |||||
Sbjct 362 TGGTCCGTTTGAGCCTTTCCTTCTGTGGAACCTCATGCCCTTCACTGGGCGTGTTGGGGA 421
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 422 AACAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATTTGCTCGAATACAT 481
Query 125 TAGCATGGAATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
|||||||||||||||||||||||||| || | |||||||||||||| |||| ||||
Sbjct 482 TAGCATGGAATAATAGAATAGGACGTCGCTG-CCTATTTTGTTGGTTCATAGG-TAGCCG 539
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
||||||| ||||||| |||||| |||||| || |||| ||||||||||||||||||||
Sbjct 540 TAATGATCAATAGGGCCGGTCGGGTGTGTCAATACTCAAGTGTCAGAGGTGAAATTCTTG 599
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
|||| |||| || |||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct 600 GATTACTTGATGATTAACTACTGCGAAAGCATTCACAAAGGACGTTTTCATTAATCAGTG 659
Query 304 AACGAAAGTTAGGGG 318
|||||||||| ||||
Sbjct 660 AACGAAAGTTGGGGG 674
>seq1165
Length=8953
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 289 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 348
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 349 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 407
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 408 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 467
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 468 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 526
Query 311 GTTAGGGG 318
||| ||||
Sbjct 527 GTTGGGGG 534
>seq2030
Length=1036
Score = 192 bits (212), Expect = 1e-46
Identities = 187/238 (79%), Gaps = 2/238 (1%)
Strand=Plus/Plus
Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99
|| |||| ||||| | | || | || | ||| |||||||||| ||||||||||| ||
Sbjct 287 TGGCCTTAACTGGCCGGGTCGTGCCTCCGGTACTGTTACTTTGAAGAAATTAGAGTGCTC 346
Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
|||||| |||| |||| | |||||||||||||| |||| | |||||| | |||| ||
Sbjct 347 AAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATCATAGGAT-TCCGGTCCT 405
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218
||| |||||| | ||| || ||||||||||| ||||| ||||||||| | ||||
Sbjct 406 ATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTAT 465
Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
| || |||||||||||||||||||||||||| ||||| ||| ||||||||||| ||
Sbjct 466 TTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATT 523
>seq1871
Length=3978
Score = 183 bits (202), Expect = 6e-44
Identities = 164/203 (81%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 3276 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 3217
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||
Sbjct 3216 GGGATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 3158
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||| ||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 3157 TAACAGGGACAGTTGGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 3098
Query 251 TGAAGACTAACTACTGCGAAAGC 273
||||| ||| |||||||||||
Sbjct 3097 GAAAGACGAACAACTGCGAAAGC 3075
>seq195
Length=1358929
Score = 183 bits (202), Expect = 6e-44
Identities = 164/203 (81%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| ||| | ||||||||||||
Sbjct 1294470 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACTCTGTATACATTAGCAT 1294529
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||
Sbjct 1294530 GGGATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 1294588
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 1294589 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1294648
Query 251 TGAAGACTAACTACTGCGAAAGC 273
||||| ||| |||||||||||
Sbjct 1294649 GAAAGACGAACAACTGCGAAAGC 1294671
Score = 141 bits (156), Expect = 2e-31
Identities = 125/155 (81%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178
|||||||||||||| |||| | |||||| | |||| ||||| |||||| | | |||
Sbjct 1238854 ATACATTAGCATGGGATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTTGGGAT 1238912
Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
|| ||||||||||| ||||| ||||||||| | |||| || ||||||||||||||
Sbjct 1238913 CGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCATATTTCATAGTCAGAGGTGAAAT 1238972
Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273
|||||||||||| ||||| ||| |||||||||||
Sbjct 1238973 TCTTGGATTTATGAAAGACGAACAACTGCGAAAGC 1239007
Score = 132 bits (146), Expect = 9e-29
Identities = 157/205 (77%), Gaps = 7/205 (3%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| |||||| |||| |||||| | |||| |||| | ||| ||||||||
Sbjct 1228151 CTGTTACTTTGAAGAAATTAAAGTGCTCAAAGTAAGCCTACGCTCTGTATATATTAGCAT 1228210
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | ||| || |||||| ||||| |||||| | ||| || ||||||||
Sbjct 1228211 GGGATAACATCATAAGAT-TGCGGTCCTATTGTGTTGGCCTTCGGGATCGAAGTAATGAT 1228269
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTA-TTCAATTGTCAGAGGTGA-AATTCTTGGATTT 248
||||||||| ||||||||| | ||| || || || ||||||| | || ||||||||
Sbjct 1228270 TAATAGGGACAGTCGGGGGCATTCGTATTTTCATAGT--GAGGTGACATTTTTTGGATTT 1228327
Query 249 ATTGAAGACTAACTACTGCGAAAGC 273
|| |||| ||| ||||| |||||
Sbjct 1228328 ATGAAAGATGAACAACTGC-AAAGC 1228351
Score = 116 bits (128), Expect = 7e-24
Identities = 113/144 (78%), Gaps = 1/144 (1%)
Strand=Plus/Plus
Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189
||| |||| | |||||| | |||| ||||| |||||| | ||| || |||||||
Sbjct 1298562 TGGGATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGA 1298620
Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249
|||| ||||| ||| ||||| | ||||| || |||||||||||||||||||||||||
Sbjct 1298621 TTAACAGGGACAGTTGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 1298680
Query 250 TTGAAGACTAACTACTGCGAAAGC 273
| ||||| ||| |||||||||||
Sbjct 1298681 TGAAAGACGAACAACTGCGAAAGC 1298704
Score = 87.8 bits (96), Expect = 3e-15
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255
|||| ||||||||| | ||||| || |||||||||||||||||||||||||| |||
Sbjct 1345740 GGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAG 1345799
Query 256 ACTAACTACTGCGAAAGC 273
|| ||| |||||||||||
Sbjct 1345800 ACGAACAACTGCGAAAGC 1345817
>seq9029
Length=255
Score = 181 bits (200), Expect = 2e-43
Identities = 163/202 (81%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||| | |||| |||| | ||||||||||||
Sbjct 244 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGAAAGCCTACGCTCTGTATACATTAGCAT 185
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||
Sbjct 184 GGGATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 126
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 125 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 66
Query 251 TGAAGACTAACTACTGCGAAAG 272
||||| ||| ||||||||||
Sbjct 65 GAAAGACGAACAACTGCGAAAG 44
>seq650
Length=1207
Score = 179 bits (198), Expect = 7e-43
Identities = 163/203 (80%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| | |||||| |||| |||| | ||||||||||||
Sbjct 638 CTGTTACTTTGAAGAAATTAGAGTGCTTAAAGCAAGCCTACGCTCTGTATACATTAGCAT 579
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||
Sbjct 578 GGGATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 520
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || || |||||||||||||||||||||||
Sbjct 519 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTAT 460
Query 251 TGAAGACTAACTACTGCGAAAGC 273
||||| ||| |||||||||||
Sbjct 459 GAAAGACGAACAACTGCGAAAGC 437
>seq109
Length=8785251
Score = 163 bits (180), Expect = 5e-38
Identities = 160/203 (79%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| || ||||||| ||||||||||| |||||||| ||| |||| | ||||||||||||
Sbjct 7096393 CTGTTGCTTTGAAGAAATTAGAGTGCTCAAAGCAAACCTACGCTCTGTATACATTAGCAT 7096334
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||
Sbjct 7096333 GGGATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 7096275
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| | |||||||| | ||||| || ||||| |||||||||||||||||||
Sbjct 7096274 TAACAGGGACAATCGGGGGTATTCGTATTTCATAGTCAG--GTGAAATTCTTGGATTTAT 7096217
Query 251 TGAAGACTAACTACTGCGAAAGC 273
||||| ||| ||||||| |||
Sbjct 7096216 GAAAGACGAACAACTGCGATAGC 7096194
>seq8310
Length=407
Score = 149 bits (164), Expect = 1e-33
Identities = 121/144 (84%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 175 GGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTG 234
||| || ||||||||||| ||||| ||||||||| | |||| || ||||||||||
Sbjct 406 GGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTC-TATTTCATAGTCAGAGGTG 348
Query 235 AAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCAT 294
|||||||||||||||| ||||| ||| ||||||||||| || ||||||||||||||||
Sbjct 347 AAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCAT 288
Query 295 TAATCAGTGAACGAAAGTTAGGGG 318
|||||| ||||||||||| ||||
Sbjct 287 TAATCA-AGAACGAAAGTTGGGGG 265
>seq8824
Length=186
Score = 138 bits (152), Expect = 2e-30
Identities = 108/128 (84%), Gaps = 1/128 (1%)
Strand=Plus/Minus
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || |||||||| |||||||||||||||||
Sbjct 186 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGGGAAATTCTTGGATTTAT 127
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 126 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 68
Query 311 GTTAGGGG 318
||| ||||
Sbjct 67 GTTGGGGG 60
>seq23
Length=5704166
Score = 118 bits (130), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 5/203 (2%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTA---GCAT 130
|||||||||| |||||||||| |||||| | |||| |||| | |||||||| ||||
Sbjct 4845890 TTACTTTGAAGAAATTAGAGTACTCAAAGTAAGCCTATGCTATGTATACATTATTAGCAT 4845949
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | ||||| | |||| ||||| |||||| | ||| | ||||| ||
Sbjct 4845950 GGGATAACATCGTAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCAAAGTAATAAT 4846008
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| |||| || ||| | | | |||||| || |||| ||||||||||||| ||||| |
Sbjct 4846009 TAACAGGGTTATTCGAGAGCATTAGTATTTCATAGTCATAGGTGAAATTCTTAGATTTGT 4846068
Query 251 TGAAGACTAACTACTGCGAAAGC 273
|||| ||| | ||| |||||
Sbjct 4846069 GAAAGATGAACAATTGCAAAAGC 4846091
>seq15020
Length=1050
Score = 107 bits (118), Expect = 4e-21
Identities = 79/91 (87%), Gaps = 1/91 (1%)
Strand=Plus/Minus
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
||||||||||| ||||| ||||||||| | ||||||| | ||||||||||||||||||
Sbjct 1045 GTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTCA-TAGTCAGAGGTGAAATTCTT 987
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGC 273
|||||||| ||||| ||| |||||||||||
Sbjct 986 GGATTTATGAAAGACGAACAACTGCGAAAGC 956
>seq16640
Length=115
Score = 93.3 bits (102), Expect = 8e-17
Identities = 91/116 (78%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179
||||||||||||| |||| | |||||| | |||| ||||| |||||| | ||| |
Sbjct 115 TACATTAGCATGGGATAACATCATAGGAT-TCCGGTCCTATTATGTTGGCCTTCGGGATC 57
Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGA 235
| ||||||||||||||||| ||||||||| | ||||| || |||||||||||
Sbjct 56 GGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGA 1
>seq3842
Length=639
Score = 89.7 bits (98), Expect = 9e-16
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254
||||| ||||||||| | ||||| || |||||||||||||||||||||||||| ||
Sbjct 344 AGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAA 403
Query 255 GACTAACTACTGCGAAAGC 273
||| ||| |||||||||||
Sbjct 404 GACGAACAACTGCGAAAGC 422
>seq9274
Length=1104
Score = 84.2 bits (92), Expect = 4e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||
Sbjct 180 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAA 121
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG 168
| |||| | |||||| | |||| ||||| ||||||
Sbjct 120 AGGATAACATCATAGGA-TTCCGGTCCTATTGTGTTGG 84
>seq2690
Length=1481129
Score = 82.4 bits (90), Expect = 1e-13
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 639674 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 639733
Query 131 GGAATAATAGAATAGGA 147
|| |||| | ||||||
Sbjct 639734 GGGATAACATCATAGGA 639750
>seq16444
Length=1006
Score = 73.4 bits (80), Expect = 7e-11
Identities = 53/60 (88%), Gaps = 1/60 (2%)
Strand=Plus/Plus
Query 259 AACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||| ||||||||||| || |||||||||||||||||||||| ||||||||||| ||||
Sbjct 140 AACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914867086848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |