Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq5649 783 0.0
seq2225 702 0.0
seq2566 688 0.0
seq195 266 1e-68
seq276 244 4e-62
seq1165 232 3e-58
seq9295 192 2e-46
seq3720 187 1e-44
seq20609 176 2e-41
seq13572 163 1e-37
seq74 145 3e-32
seq26917 141 4e-31
seq22553 141 4e-31
seq3719 127 9e-27
seq9482 123 1e-25
seq7438 118 4e-24
seq7330 105 3e-20
seq23720 102 3e-19
seq18324 98.7 4e-18
>seq5649
Length=13326
Score = 783 bits (868), Expect = 0.0
Identities = 574/657 (87%), Gaps = 15/657 (2%)
Strand=Plus/Plus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1313 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 1372
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 CTAAAGCTAAATATCTGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 1432
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1433 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCAAC 1492
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267
|||||||||| || | || |||||||| | | ||| ||| |||| || | |||||
Sbjct 1493 CAGACTTGCCTGC-GGTGTTCAACCGGTCTTTTGGCTGGTCTACTCATC-GTAAGCAGGC 1550
Query 268 CAGCATCAGCTCGGGCGGTCGGATAA-AGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326
|| ||||| | |||| || |||||| ||| | ||||||| ||||| || ||||||
Sbjct 1551 CAACATCACTTGGGGCCGTGGGATAATAGG--TCTGGAATGTAGCCCC--TC--GGGGTG 1604
Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGC 386
|||||||| || |||| | || || |||||||||||| |||||||||
Sbjct 1605 TTATAGCCAATCCTG--ATGCCACGAGCGCCGAGTGAGGTCCGCGCATTAGCTAGGATGT 1662
Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446
||||||||||||||||| |||||||||||| |||||||||||||||||| | || | | |
Sbjct 1663 TGGCGTAATGGTTGTAAACGGCCCGTCTTGAAACACGGACCAAGGAGTCGATCACCCACG 1722
Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506
||||||||||||||| |||||| |||||||||||||||||||||||||||| | |
Sbjct 1723 CGAGTGTTTGGGTGTAAAACCCTCACGCGTAATGAAAGTGAACGGAGGTGGGAGC---TT 1779
Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566
| || ||||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct 1780 A-GGCGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCGTGGTTGA 1838
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 1839 TCGGACCCGAAAGATGGTGAACTATACGTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 1898
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 1899 GAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGCGTATAGGGGCGA 1955
>seq2225
Length=7605
Score = 702 bits (778), Expect = 0.0
Identities = 555/656 (85%), Gaps = 22/656 (3%)
Strand=Plus/Plus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3216 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATGTCTT 3275
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3276 CTAAAGCTAAATATCTGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 3335
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3336 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCAAC 3395
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGG----CCCCTCGGCCGGTGCACTCTTCTGCGGTC 263
|||||||| |||| || |||||||| |||| | | |||| || || |
Sbjct 3396 CAGACTTGTTTGCAG-TGTTCAACCGGTTTTTTAATCGGTCTATTCACTGTT-TG----C 3449
Query 264 AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323
|||||||||||| | || | || |||||| | ||||||||| | |||| ||
Sbjct 3450 AGGCCAGCATCACTTGGGACTGTGGGATAATAG-TTATGGAATGTGG--CTCTTC--GGA 3504
Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGA 383
||||||||||| | || || | | | || || |||||||||||| |||||||
Sbjct 3505 GTGTTATAGCCAGAACTG--ATACCACAAGACTCGAGTGAGGTCCGCGC-ATTGCTAGGA 3561
Query 384 TGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCT 443
||||||||||||||||||||||||||||||||| |||||||||| ||||||| | || ||
Sbjct 3562 TGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGAAACACGGACCGAGGAGTCGATCACCT 3621
Query 444 ATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCC 503
|||||||| || ||||| ||||| | |||||||||||||||||||||||||||
Sbjct 3622 ATGCGAGTATTAAGGTGTTAAACCTTTATGCGTAATGAAAGTGAACGGAGGTGGGA---- 3677
Query 504 GTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGC 563
| || ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3678 GCTTCGGCGCACCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGAGCATAGT 3737
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|| | ||||||||||||||||||||||| | |||||||| ||||||||| |||| |||
Sbjct 3738 TGATCGGACCCGAAAGATGGTGAACTATACGTGAATAGGATGAAGCCAGGCGAAAGCCTG 3797
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 3798 GTGGAGGTCCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGCGTATAGGG 3853
>seq2566
Length=12546
Score = 688 bits (762), Expect = 0.0
Identities = 555/658 (84%), Gaps = 16/658 (2%)
Strand=Plus/Plus
Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86
|| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167 AAACTTCTTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 1226
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1227 TCTAAAGCTAAATATCTGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 1286
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1287 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGTTTATTA 1346
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGC-ACTCTTCTGCGGTCAG 265
||||||||| || ||| ||| || || || | | || ||| | || || ||||
Sbjct 1347 CCAGACTTGATCGGAGTAT-TCA-CCTGCTTCTTGAAGTGGGCTACT-TGCTTCGATCAG 1403
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
|||| ||||| | | || |||||| | || ||||| || || |||| | |
Sbjct 1404 GCCAACATCATTTGTGAGAGTGGGATAATAATTCAGG-AATGTAGCTCC--TCGGAG--T 1458
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
||||||||| | || || | | || || ||||||||||| | | ||||||||
Sbjct 1459 GTTATAGCCTAAGTTG--ATACCACTACCCACGAATGAGGTCCGCGTTATG-CTAGGATG 1515
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
|||||||||||| ||| |||||||||||| |||||||||||||||||| | | |||
Sbjct 1516 TTGGCGTAATGGTCATAAACGGCCCGTCTTGAAACACGGACCAAGGAGTCGATTAATTAT 1575
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
|||||| |||||||||||||||| | ||| ||| |||||||||||||||| || | |
Sbjct 1576 GCGAGTATTTGGGTGTCAAACCCTTATGCGCAATTAAAGTGAACGGAGGTGAGAGC---T 1632
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1633 TAGGC-GCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAATTA 1691
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692 ATCGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 1751
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1752 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 1809
>seq195
Length=1358929
Score = 266 bits (294), Expect = 1e-68
Identities = 228/280 (81%), Gaps = 4/280 (1%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|||||||||||| ||||||||||||||||||| |||| | ||||||| |||||| |||
Sbjct 1357497 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAATGGGTGGCAA 1357556
Query 465 ACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523
|||||| | ||||| ||| ||| || ||||| ||| | ||||||||| |||||
Sbjct 1357557 ACCCGTAAGGCGTAAGGAAGCTGATTGG---TGGGATCCCTTTTGGGTGCACCGCCGACC 1357613
Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583
|| | |||| | | || || || |||| ||||||| |||| ||||||||||||||||
Sbjct 1357614 GACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATGG 1357673
Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643
|||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
Sbjct 1357674 TGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATAC 1357733
Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||||||||||| ||||| | ||||||||||||||||
Sbjct 1357734 TAACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 1357773
Score = 179 bits (198), Expect = 2e-42
Identities = 126/144 (88%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599
|| || || |||| ||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 1337643 GAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGC 1337702
Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659
|||| ||||||||||||||||||||||||||| ||||||| | ||| ||||||||||| |
Sbjct 1337703 AGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTT 1337762
Query 660 CGTCAAATTTGGGTATAGGGGCGA 683
|||| | ||||||||||||||||
Sbjct 1337763 CGTCTGACTTGGGTATAGGGGCGA 1337786
Score = 156 bits (172), Expect = 2e-35
Identities = 130/159 (82%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 41 AGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA 100
||||| |||||||||||||||||| |||| ||| |||||||| | || || ||||||||
Sbjct 1357103 AGTCGGGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGGCTAAATA 1357162
Query 101 TTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAA 160
| ||| ||||||||||||| | ||||| | || ||||||||||||| |||||| |||
Sbjct 1357163 TGGGCGAGAGACCGATAGCAAATAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAA 1357222
Query 161 GAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||| ||| || | ||||||||| | |||||||||
Sbjct 1357223 GAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 1357261
>seq276
Length=2778623
Score = 244 bits (270), Expect = 4e-62
Identities = 222/278 (80%), Gaps = 4/278 (1%)
Strand=Plus/Minus
Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAAC 466
|||||||||| ||||||||||||||||||| |||| | ||||||| |||||| |||||
Sbjct 2726706 GCCCGTCTTGAAACACGGACCAAGGAGTCTGACATATGTGCGAGTCAATGGGTGGCAAAC 2726647
Query 467 CCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGA 525
|| | | ||||| ||| ||| || ||||| ||| | ||||||||| |||||||
Sbjct 2726646 CCATAAGGCGTAAGGAAGCTGATTGG---TGGGATCCCTTTTGGGTGCACCGCCGACCGA 2726590
Query 526 TCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTG 585
| |||| | | || || || |||| ||||||| |||| |||||||||||||| |||
Sbjct 2726589 CCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTGGGGACCCGAAAGATAGTG 2726530
Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645
|||||||||||| | ||| ||||||||| |||||||||||||||| |||||| | |||
Sbjct 2726529 AACTATGCCTGAGTGGGGCAAAGCCAGAGAAAACTCTGGTGGAGGCCTGCAGCGATACTG 2726470
Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||| | ||| | ||||||||||||||||
Sbjct 2726469 ACGTGCAAATCGTTTGTCTGACTTGGGTATAGGGGCGA 2726432
Score = 145 bits (160), Expect = 3e-32
Identities = 131/165 (79%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
||| |||||||||||||||||||||||||| |||| ||| ||||||| || || ||
Sbjct 2727094 TCGGCGAGTCGAGTTGTTTGGGAATGCAGCCCTAATCGGGCAGTAAATTCTGTCCAAGGC 2727035
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| || ||||||||||||| ||||||| | | ||||||||||||| ||||
Sbjct 2727034 TAAATATGGGTGAGAGACCGATAGCAAACAAGTACCGCAAGGGAAAGATGAAAAGGACTT 2726975
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||| ||||| ||| || | || |||||| | |||||||||
Sbjct 2726974 TGAAAATAGAGTCAAAGAGTGCTTGTAATTGTCGGGAGGGAAGCG 2726930
>seq1165
Length=8953
Score = 232 bits (256), Expect = 3e-58
Identities = 222/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 2616 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 2675
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 2676 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 2732
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 2733 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 2792
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| |||| ||||||||||||||||||||||| || ||||||| |
Sbjct 2793 GTGAACTATGCCTGAGCGGGGTAAAGCCAGAGGAAACTCTGGTGGAAGCCCGCAGCGATA 2852
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 2853 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 2893
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 2230 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 2289
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 2290 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 2349
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 2350 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 2394
>seq9295
Length=212
Score = 192 bits (212), Expect = 2e-46
Identities = 157/191 (82%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 493 GGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552
||||||| ||| | ||||||||| ||| ||| | |||| | | || || || ||||
Sbjct 13 GGTGGGATCCCTTTTGGGTGCACCGCCGATCGACCTTGATCTTCTGAGAAGGGTTCGAGT 72
Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612
||||||| |||| |||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 73 GAGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAG 132
Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672
||||||||||||||||||| ||||||| | ||| |||| |||||| ||||| | |||||
Sbjct 133 AGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGTAAATCGTTCGTCTGACTTGGG 192
Query 673 TATAGGGGCGA 683
|||||||||||
Sbjct 193 TATAGGGGCGA 203
>seq3720
Length=448
Score = 187 bits (206), Expect = 1e-44
Identities = 173/215 (80%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|||||||||||| ||||||||||||||||||| |||| | ||||||| |||||| |||
Sbjct 110 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAATGGGTGGCAA 169
Query 465 ACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523
|||||| | ||||| ||| ||| || ||||| ||| | ||||||||| |||||
Sbjct 170 ACCCGTAAGGCGTAAGGAAGCTGATTGG---TGGGATCCCTTTTGGGTGCACCGCCGACC 226
Query 524 GATCCTGAT-GTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
|| | |||| |||| | | || || |||| ||||||| |||| |||||||||||||||
Sbjct 227 GACCTTGATCGTCTAAGAAGGG-TTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATG 285
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
||||||||||||||| ||| |||||||||||||
Sbjct 286 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAA 320
>seq20609
Length=112
Score = 176 bits (194), Expect = 2e-41
Identities = 105/110 (95%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 64 CTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCAC 123
||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1 CTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCAC 60
Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAG 173
||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 61 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAACAG 110
>seq13572
Length=865
Score = 163 bits (180), Expect = 1e-37
Identities = 135/165 (82%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
||| ||||||| ||||||||| |||||||| |||| ||| |||||||| | || || ||
Sbjct 551 TCGGCGAGTCGGGTTGTTTGGCAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGGC 610
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| ||| ||||||||||||| ||||||| | || ||||||||||||| ||||
Sbjct 611 TAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 670
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 671 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 715
>seq74
Length=10145792
Score = 145 bits (160), Expect = 3e-32
Identities = 110/130 (85%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 449642 AGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGA 449583
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
|||||||||||||||||| ||| ||| | | ||||||||| | |||| | ||||||
Sbjct 449582 GGAAACTCTGGTGGAGGCCCGCTGCGATATCGACGTGCAAATTGTTCGTTTGACTTGGGT 449523
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 449522 ATAGGGGCGA 449513
>seq26917
Length=5014
Score = 141 bits (156), Expect = 4e-31
Identities = 126/158 (80%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| ||||||| |||||||||| ||| ||| ||||||| | || || |||||||
Sbjct 4449 GAGTCGGGTTGTTTAGGAATGCAGCCTTAATCGGGCAGTAAATTCCATCCAAGGCTAAAT 4508
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| | | ||||||||||||| | ||||| | || ||||||||||||| |||| | ||
Sbjct 4509 ATGGTCGAGAGACCGATAGCAAATAAGTATTGCGAGGGAAAGATGAAAAGGACTTCGAAA 4568
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
||||||| ||| || | ||||||||| ||||||||||
Sbjct 4569 AGAGAGTGAAAGAGTGCTTGAAATTGTCGAAAGGGAAG 4606
Score = 123 bits (136), Expect = 1e-25
Identities = 137/181 (76%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 411 GTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGT 470
|||||| ||||||||||||||| ||| |||| | ||| | | |||||| ||||||| |
Sbjct 4837 GTCTTGAAACACGGACCAAGGAATCTGACATGTGTGCAAATCAATGGGTGGCAAACCCAT 4896
Query 471 GCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCT 529
| | | ||| ||| | | || ||||| ||| | ||||| |||||||||||| | |
Sbjct 4897 GAGGCATAAGGAAGCTAATTGG---TGGGATCCCTTTTGGGTGTACCATCGACCGACCTT 4953
Query 530 GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589
||| | | || || || ||| ||||||| |||| ||||||||||||||||||||||
Sbjct 4954 GATCTTCTGAGAAGGGTTCAAGTGAGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACT 5013
Query 590 A 590
|
Sbjct 5014 A 5014
>seq22553
Length=245
Score = 141 bits (156), Expect = 4e-31
Identities = 113/136 (83%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
||| ||||||| |||||||||||||||||| |||| ||| |||||||| | || || ||
Sbjct 108 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGGC 167
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| ||| ||||||||||||| ||||||| || ||||||||||||| ||||
Sbjct 168 TAAATATGGGCGAGAGACCGATAGCAAACAAGTACCACGAGGGAAAGATGAAAAGGACTT 227
Query 155 TGGAAAGAGAGTTAAA 170
|| ||||||||| |||
Sbjct 228 TGAAAAGAGAGTCAAA 243
>seq3719
Length=1027
Score = 127 bits (140), Expect = 9e-27
Identities = 133/173 (77%), Gaps = 4/173 (2%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|||||||||||| ||||||||||||||||||| |||| | ||||||| |||||| |||
Sbjct 277 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAATGGGTGGCAA 336
Query 465 ACCCGT-GCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523
|||||| |||||| ||| ||| ||| ||| ||| | ||||||||| |||||
Sbjct 337 ACCCGTAAGGCGTAAGGAAGCTGA---TTGGTAGGATCCCTTTTGGGTGCACCGCCGACC 393
Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGA 576
|| | |||| | | || || || |||| ||||||| |||| |||||||||
Sbjct 394 GACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGA 446
Score = 113 bits (124), Expect = 2e-22
Identities = 98/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 76 GGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGAT 135
|||||||| | || || ||||||||| ||| |||||||| |||| ||||||| | ||
Sbjct 3 GGTAAATTCCGTCCAAGGCTAAATATGGGCGAGAGACCGGTAGCAAACAAGTACCGCGAG 62
Query 136 CGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGA 195
||||||||||||| |||||| ||||||||| ||| || | ||||||||| | |||||
Sbjct 63 GGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGA 122
Query 196 AG 197
||
Sbjct 123 AG 124
>seq9482
Length=240
Score = 123 bits (136), Expect = 1e-25
Identities = 97/116 (84%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106
|||||||||||||||||| |||| ||| |||||||| | || || ||||||||| |||
Sbjct 3 GTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCATCCAAGGCTAAATATGGGCG 62
Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGA 162
||||||||||||| ||||||| | || ||||||||||||| |||||| |||||
Sbjct 63 AGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGA 118
>seq7438
Length=191
Score = 118 bits (130), Expect = 4e-24
Identities = 94/113 (83%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
||| ||||||| |||||||||||||||||| |||| ||| |||||||| | || || ||
Sbjct 79 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGGC 138
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||| ||| ||||||||||||| ||||||| | || |||||||||||
Sbjct 139 TAAATATGGGCAAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAA 191
>seq7330
Length=199
Score = 105 bits (116), Expect = 3e-20
Identities = 91/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|| || ||||||||| ||| ||||||||||||| ||||| | | || ||||||||||
Sbjct 2 TCCAAGGCTAAATATGGGCGAGAGACCGATAGCAAACAAGAACCGCGAGGGAAAGATGAA 61
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||| |||||| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 62 AAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 114
>seq23720
Length=269
Score = 102 bits (112), Expect = 3e-19
Identities = 79/94 (84%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
||| ||||||| |||||||||||||||||| |||| ||| |||||||| | || || |
Sbjct 169 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGAC 228
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTA 128
||||||| ||| ||||||||||||| |||||||
Sbjct 229 TAAATATGGGCGAGAGACCGATAGCAAACAAGTA 262
>seq18324
Length=125
Score = 98.7 bits (108), Expect = 4e-18
Identities = 96/122 (79%), Gaps = 4/122 (3%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|||||||||||| ||||||||||||||||||| |||| ||||||||| |||||| |||
Sbjct 3 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTATGCGAGTCAATGGGTGGCAA 62
Query 465 ACCCGT-GCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523
|| ||| |||||| ||| || ||||||| ||| | ||||||||| |||||
Sbjct 63 ACTCGTAAGGCGTAAGGAAGCCGA---TTGGTGGGATCCCTTTTGGGTGCACCGCCGACC 119
Query 524 GA 525
||
Sbjct 120 GA 121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079219734800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |