Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq1165 89.7 2e-16
seq13572 84.2 1e-14
seq2690 84.2 1e-14
seq276 84.2 1e-14
seq8829 80.6 1e-13
seq1196 80.6 1e-13
>seq1165
Length=8953
Score = 89.7 bits (98), Expect = 2e-16
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 2027 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 2085
>seq13572
Length=865
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 348 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 406
>seq2690
Length=1481129
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||
Sbjct 639349 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACAGGAAAGAGCCCAGC 639407
>seq276
Length=2778623
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||
Sbjct 2727297 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAACCAGGAAGAGCCCAGC 2727239
>seq8829
Length=869
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| || ||||||||| |||| ||||||||||||||
Sbjct 312 GGAAAAGAAACTAACAAGGATTCCCCTAGCAACGGCGAGCGAACCGGGAAGAGCCCAGC 370
>seq1196
Length=1127
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| |||||||||||| |||| | ||||||||||||
Sbjct 937 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGAGAAGAGCCCAGC 995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230321427840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |