Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq24 320 4e-85
seq569 300 3e-79
seq276 297 4e-78
seq652 288 2e-75
seq2764 280 3e-73
seq31330 273 5e-71
seq74 266 7e-69
seq3956 264 2e-68
seq35146 208 2e-51
seq28361 197 3e-48
seq18 122 2e-25
seq86 107 4e-21
seq16029 93.3 9e-17
seq19315 87.8 4e-15
seq5812 87.8 4e-15
seq1392 87.8 4e-15
seq198 87.8 4e-15
seq26 87.8 4e-15
seq920 77.0 7e-12
seq4148 75.2 2e-11
>seq24
Length=10012559
Score = 320 bits (354), Expect = 4e-85
Identities = 285/353 (81%), Gaps = 8/353 (2%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| || | |||||| ||||| | | ||||||||||||| ||||||
Sbjct 3988195 GCATCTTCACAAACATGTCTATTTCATCGAGTTTCTCTCGGAGACAGTGCCCAGATCGTT 3988254
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3988255 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 3988314
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| | ||||||| || | ||| | | | || | ||
Sbjct 3988315 TAGTTACGGCCGCCGTTCATCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 3988374
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 3988375 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 3988434
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || |||||||||||||||||| |||||| |||||| || ||||| ||| |
Sbjct 3988435 GCGGAGACCTGTGTTTTTGGTAAATAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 3988494
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 3988495 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 3988546
Score = 178 bits (196), Expect = 3e-42
Identities = 190/246 (77%), Gaps = 14/246 (6%)
Strand=Plus/Plus
Query 117 AGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTC 176
||||||||||||||||||||||||||| || ||||||| | |||| | || || ||
Sbjct 3990429 AGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTT-CGGTCACCGGCTCCCCTG-TC 3990486
Query 177 TAACAGATC-------CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATC 229
| ||| || |||| ||||||| |||| ||| |||||||||| || ||||||
Sbjct 3990487 -ATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGTAGGCGTCAGCCCCCATACATG 3990545
Query 230 GTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG 289
||||| |||||| || || || |||||||||||||||||||||| || ||| || |||
Sbjct 3990546 GTCTTACGACTTTGCGGAGACTTGTGTTTTTGGTAAACAGTCGCCCGGTCCTGGTCACTG 3990605
Query 290 CG---GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGT 346
|| ||| | || |||||||||||||| | ||||||||||| |||||||| |||
Sbjct 3990606 CGACCCCCTTTGTGAG-GAGGCACCCCTTCTCTCGAAGTTACGGGGCTATTTTGCCAAGT 3990664
Query 347 TCCTTA 352
||||||
Sbjct 3990665 TCCTTA 3990670
>seq569
Length=4400913
Score = 300 bits (332), Expect = 3e-79
Identities = 279/351 (79%), Gaps = 6/351 (2%)
Strand=Plus/Minus
Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67
||||||||| | || | |||||||||||| | | |||||| ||||||||||||||
Sbjct 260141 CATCTTCACAGACATGTCTATTTCACCGAGTTTCTCTCCGAGACAATGCCCAAATCGTTA 260082
Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127
||||||||||| |||||||||||||||||||||||||||||| |||||||| ||| ||||
Sbjct 260081 CGCCTTTCGTGTGGGTCGGAACTTACCCGACAAGGAATTTCGTTACCTTAGAACCTTTAT 260022
Query 128 AGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAGA 183
||||||||||||||||||| | ||||| ||| | ||| | | | || | || |
Sbjct 260021 AGTTACGGCCGCCGTTTACCGAGGCTTCAGTCGCCGGCTCCCCTGTTATCAGGTCACCAA 259962
Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243
|||| ||||||| |||| |||||||||||||| || |||||| ||||| ||| || |
Sbjct 259961 CTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGAATTTG 259902
Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG--GCCTGTCATA 301
| || ||||||||| |||||||||| | || ||||| || ||||| ||| | |
Sbjct 259901 TGTAGACTTGTGTTTTTAGTAAACAGTCACCTGAGCCTAGTCACTGCGACCCCTTTTGTG 259842
Query 302 GACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
||||||| |||||||| |||||||||||| ||||||||||||||||||
Sbjct 259841 AGGAGGCACCTCTTCTCCCGAAGTTACGGGGTTATTTTGCCGAGTTCCTTA 259791
>seq276
Length=2778623
Score = 297 bits (328), Expect = 4e-78
Identities = 283/358 (79%), Gaps = 18/358 (5%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | |||||||||||| | | | ||||||||||| ||||||||
Sbjct 1912638 GCATCTTCACAGACATGTCTATTTCACCGAGTTTCTCTTCGAGACAGTGCCTAAATCGTT 1912579
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1912578 ACGCCTTTCATGCTGGTCAGAACTTACCCGACAAGGAATTTCATTACCTTAGGACCGTTA 1912519
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATC- 185
||||||||| |||| || || ||||||| | || ||| || || || | ||| ||
Sbjct 1912518 TAGTTACGGTCGCCATTCACCGGGGCTT-CGGTCGCTGGCTCCCTT-ATC-ATCAGGTCA 1912462
Query 186 ------CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239
|||| || |||| |||| |||||| |||||| || |||||| ||||| ||||
Sbjct 1912461 CCAACTTCCTTGACTTTCCGGCACTAGGCAGGTGTCAGCCCCCATACATGGTCTTACGAC 1912402
Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC----- 294
|| ||||| ||||||||||||||||||||||||| |||||| || || || ||
Sbjct 1912401 TTTGCAGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTACGACCCTCTT 1912342
Query 295 TGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
||| || |||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct 1912341 TGTGAT---GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCAAGTTCCTTA 1912287
>seq652
Length=2384379
Score = 288 bits (318), Expect = 2e-75
Identities = 267/333 (80%), Gaps = 8/333 (2%)
Strand=Plus/Minus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
|||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||
Sbjct 212606 ATTTCACCGAGTTTCTCTCTGAGACAGTGCTCAAATCGTTACGCCTTTCGTGCGGGTCGG 212547
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146
|||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||| ||
Sbjct 212546 AACTTACCCGACAAGGAATTTCACTACTTTAGGACCATTATAGTTATAGCCGCCGTTCAC 212487
Query 147 TGGGGCTTAAGTTCACTGCTTCGAT-TGCTC----TAACAGATCCCCTTAACCTTCCAGC 201
||||||| || | ||| | | | || |||| | |||||||||| | ||
Sbjct 212486 CGGGGCTTCGGTCGTCGGCTCCCCTGTCATCAGGTCAACA-ACTTCCTTAACCTTTCGGC 212428
Query 202 ACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTG 261
|| |||||||||||| | ||||||||| ||||| |||||| | || |||||||||||||
Sbjct 212427 ACTGGGCAGGCGTCAACCCCTATACATGGTCTTACGACTTTGTGGAGACCTGTGTTTTTG 212368
Query 262 GTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT-AGA-CAGGCACCCCTTCTCC 319
|||||||||| | |||||| || || || || || | || |||||||| |||| |
Sbjct 212367 GTAAACAGTCACCCGGGCCTGGTCACTTCGACCCCTCTTGTGAGGAGGCACCCTTTCTTC 212308
Query 320 CTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
||||||||||| ||||||||||||||||||
Sbjct 212307 TGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 212275
>seq2764
Length=4463
Score = 280 bits (310), Expect = 3e-73
Identities = 226/271 (83%), Gaps = 4/271 (1%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 4317 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 4258
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4257 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4198
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 4197 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 4138
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||||||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 4137 ACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 4078
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273
|| || |||||||||||||||||||||||||
Sbjct 4077 GCGGAGACCTGTGTTTTTGGTAAACAGTCGC 4047
>seq31330
Length=2953
Score = 273 bits (302), Expect = 5e-71
Identities = 286/376 (76%), Gaps = 20/376 (5%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | ||||||||||| ||| || ||||||| | |
Sbjct 2457 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 2516
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 2517 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 2576
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
| |||| |||||| |||||||||||| ||||||| |||| ||| | ||||
Sbjct 2577 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCT--------TATAAC 2628
Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
| || |||| |||||||||||||||||||| ||||| ||||||||||| || | |
Sbjct 2629 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 2688
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298
||||||||| ||||||||||| |||||||||||| ||| | | ||| || | |
Sbjct 2689 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 2748
Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348
| ||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 2749 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 2808
Query 349 CTTAACAATAGTTCTC 364
||| || ||||||
Sbjct 2809 CTTCGACATGGTTCTC 2824
>seq74
Length=10145792
Score = 266 bits (294), Expect = 7e-69
Identities = 260/332 (78%), Gaps = 6/332 (2%)
Strand=Plus/Plus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
||||||| |||| | | |||| |||||||| ||||||||||||||||||||||| ||
Sbjct 508871 ATTTCACTGAGTTTCTCTCCGAGATAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTTGG 508930
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146
|||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||
Sbjct 508931 AACTTACCCGACAAGGAATTTCACTACCTTAGGACCGTTATAGTTACAGCCGTCGTTCAC 508990
Query 147 TGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAGATCCCCTTAACCTTCCAGCA 202
|||||| || | ||| | | | || | || | |||| ||||| | |||
Sbjct 508991 CAGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTTCGGCA 509050
Query 203 CCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGG 262
| ||||||||||||| || |||||| ||||| ||||| || || || |||||||||||
Sbjct 509051 CTAGGCAGGCGTCAGCCCCCATACATGGTCTTATGACTTTGCGGAGACTTGTGTTTTTGG 509110
Query 263 TAAACAGTCGCTTGGGCCTATTCTCTGC--GGCCTGTCATAGACAGGCACCCCTTCTCCC 320
|||||||||||| |||||| || |||| ||| | || |||||||| ||||||
Sbjct 509111 TAAACAGTCGCTCGGGCCTGGTCACTGCAACCCCTTTTATGAGGAGGCACCCTTTCTCCT 509170
Query 321 TAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
||||||||||| |||||| ||||||| |||
Sbjct 509171 GAAGTTACGGGGCTATTTTGTCGAGTTCGTTA 509202
>seq3956
Length=4762
Score = 264 bits (292), Expect = 2e-68
Identities = 224/273 (82%), Gaps = 11/273 (4%)
Strand=Plus/Minus
Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTG-AGACAGTGCCCAA 60
|||| |||||||||| |||| | ||||||||| ||| || |||| |||||| | ||
Sbjct 3977 ACCCCGCATCTTCACGGGGACTTCAATTTCACTGAG-CTGACGTTGGAGACAGCGGGGAA 3919
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
|| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3918 GTCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 3859
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
|||||||||||||||||||||||||| ||||||| | |||| ||||| ||
Sbjct 3858 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTT--------CGATTCG-GGGCTCTCAC 3808
Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240
||| ||| ||||||| |||||||||||||||||| ||||||| || |||||||| |
Sbjct 3807 TCCTCCTCTTGACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCATCTTGCGATT 3748
Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273
| ||||| |||||||||||| |||||||| ||
Sbjct 3747 TCGCAGAGTCCTGTGTTTTTGTTAAACAGTTGC 3715
>seq35146
Length=11046
Score = 208 bits (230), Expect = 2e-51
Identities = 267/367 (73%), Gaps = 37/367 (10%)
Strand=Plus/Minus
Query 15 ACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTT 74
||||| | || ||| |||||||||||| || || ||||||||||||||
Sbjct 5062 ACCGGTACTAAGATTACACCGAGTCTATAGTGGA------------ATCGTTACGCCTTT 5015
Query 75 CGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACG 134
| |||||||| ||||||||| ||||||||||||||||||||| ||| |||| ||||||||
Sbjct 5014 CATGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACCTTTGGATCGTTCTAGTTACG 4955
Query 135 GCCGCCGTTTACTGGGGCTTAAGTTCA----CTGCTTCGA---TTGCTCT--------AA 179
||||||||| ||| |||||| | |||| | || | || ||| ||
Sbjct 4954 GCCGCCGTTCACTCGGGCTTCAATTCATAACGTAACTCAAAATTTTATCTTTTTAGTGAA 4895
Query 180 CAGATCCCCTTAACCTTCCAGCAC-CGGGCAGGCGT---CAGCTCCTATACATCGTCTTG 235
||| ||||||||| ||||| |||||||||| | |||||||| ||||
Sbjct 4894 TCCCTCCTCTTAACCTTGGAGCACTGGGGCAGGCGTCGCCCCCTCCTATA-----GCTTG 4840
Query 236 CGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT 295
|| ||||||| | | ||||||||||| ||||||||| | | |||| ||| ||||| |||
Sbjct 4839 CGCCTTAGCATAGAGCTGTGTTTTTGAGAAACAGTCGTTCGTGCCTCTTCACTGCGACCT 4780
Query 296 GTCATAGAC-AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAAC 354
| | ||||||||||||| | || |||||||| | |||||||||||||| |||
Sbjct 4779 AGGTTGCCCTAGGCACCCCTTCTTGCGAACTTACGGGGCTAATTTGCCGAGTTCCTGAAC 4720
Query 355 AATAGTT 361
||||||
Sbjct 4719 TATAGTT 4713
>seq28361
Length=1991474
Score = 197 bits (218), Expect = 3e-48
Identities = 217/283 (77%), Gaps = 8/283 (3%)
Strand=Plus/Plus
Query 77 TGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGC 136
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 604026 TGCGGGTCGGAACTTACCCGACAAGGAATTTCACTATCTTAGGACCGTTATAGTTACGGC 604085
Query 137 CGCCGTTTACTGGGGCTTAAGTTCACT-GCTTCGAT-TGCTC---TAACAGATCCCCTTA 191
||||||| || ||||||| | || || ||| | | | || | || | |||
Sbjct 604086 CGCCGTTCACCGGGGCTT-CGGTCGCTAGCTCCCCTGTCATCAGGTCACCAACTTCCTCG 604144
Query 192 ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACC 251
|||||| || || |||| ||| | | |||||| ||||| |||||| |||||||||
Sbjct 604145 ACCTTCTGACATTGGATAGGCATCAACCTCCATACATGGTCTTACGACTTTGCAGAAACC 604204
Query 252 TGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG--GCCTGTCATAGACAGGCA 309
||||||||||||||| |||||| | |||| || ||||| || | || |||||
Sbjct 604205 TGTGTTTTTGGTAAATAGTCGCCCGAGCCTGGTCACTGCGACCCCCTTTATGAGGAGGCA 604264
Query 310 CCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
||| |||||| |||||||| | |||||||||| |||||||
Sbjct 604265 CCCTTTCTCCTGAAGTTACGAGACTATTTTGCCGAATTCCTTA 604307
>seq18
Length=12238210
Score = 122 bits (134), Expect = 2e-25
Identities = 103/127 (81%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
|||||||||||| | | | ||| ||| ||| |||||||||||| || |||||||||
Sbjct 1281672 ATTTCACCGAGTTTCTCTCCGCGACTGTGGCCAGATCGTTACGCCTATCATGCGGGTCGA 1281731
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146
||||| ||| || ||||||||||||||||||| |||||||||| || |||| || ||
Sbjct 1281732 AACTTCGGCGATAATAAATTTCGCTACCTTAGGACTGTTATAGTTATGGTCGCCATTCAC 1281791
Query 147 TGGGGCT 153
|||||||
Sbjct 1281792 TGGGGCT 1281798
>seq86
Length=7715951
Score = 107 bits (118), Expect = 4e-21
Identities = 79/92 (86%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 30 TCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAAC 89
||||||||| | | ||||||||||||| | ||||| ||||||| ||||||| |||||
Sbjct 330344 TCACCGAGTTTCTCTCCGAGACAGTGCCCAGACCGTTATGCCTTTCATGCGGGTTGGAAC 330403
Query 90 TTACCCGACAAGGAATTTCGCTACCTTAGGAC 121
||||||||||||||||||| | ||||||||||
Sbjct 330404 TTACCCGACAAGGAATTTCACCACCTTAGGAC 330435
>seq16029
Length=140
Score = 93.3 bits (102), Expect = 9e-17
Identities = 82/100 (82%), Gaps = 2/100 (2%)
Strand=Plus/Plus
Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTG-AGACAGTGCCCAA 60
|||| |||||||||| |||| | ||||||||| ||| || |||| |||||| | ||
Sbjct 42 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAG-CTGACGTTGGAGACAGCGGGGAA 100
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAA 100
|| ||||||| ||||||| ||||||||||||||||||||
Sbjct 101 GTCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAA 140
>seq19315
Length=343
Score = 87.8 bits (96), Expect = 4e-15
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||||||||| ||| ||||||||| ||||||||
Sbjct 335 ATCTGCACAGCTATTCCAATTTCACCGAGTCAATTATTGAGACAGCTGTTGTATCGTTAC 276
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
| ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | ||
Sbjct 275 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 216
Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154
| || ||||||| || | ||||| ||
Sbjct 215 GGTAAGGCCGCCATTGATTGGGGGTT 190
>seq5812
Length=866
Score = 87.8 bits (96), Expect = 4e-15
Identities = 258/395 (65%), Gaps = 42/395 (11%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||||||||| || ||||||||| ||||||||
Sbjct 646 ATCTGCACAGCTATTCCAATTTCACCGAGTCAATCATTGAGACAGCTGTTGTATCGTTAC 587
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
| ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | ||
Sbjct 586 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 527
Query 129 GTTACGGCCGCCGTTTACTGGGG-----------CTTAAGTTCA-----CTGCTTCGATT 172
| || ||||||| || | |||| || || ||| || ||| ||
Sbjct 526 GGTAAGGCCGCCATTGATCGGGGTATCCTTCAAACTCTAGCTCAACAATCTACTT--GTT 469
Query 173 GCTCT-AACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCG- 230
| || || |||| | |||||| || || ||||||| | ||| | |||| | |
Sbjct 468 TCACTAAAGAGAT-TCGTTAACCAGCCGACATCGGGCAGACATCACACTCAATACCTTGA 410
Query 231 TCTTGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG 289
| || | |||| ||| | ||||||||| |||||||||| | ||||| ||
Sbjct 409 TTTTACATCTTATGCAAAGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTG 350
Query 290 CGGCC---TGTCATAG-ACA----------------GGCACCCCTTCTCCCTAAGTTACG 329
| || | ||| || ||| ||||| |||| |||||||||||||
Sbjct 349 CCTCCTCTTTTCAAAGTACAATTGTACAGTTAAAATGGCACACCTTATCCCTAAGTTACG 290
Query 330 GGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364
| |||||||||||||||||||||| || ||| ||
Sbjct 289 GAGTCATTTTGCCGAGTTCCTTAATGATTGTTATC 255
>seq1392
Length=33700
Score = 87.8 bits (96), Expect = 4e-15
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||||||||| ||| ||||||||| ||||||||
Sbjct 29270 ATCTGCACAGCTATTCCAATTTCACCGAGTCAATTATTGAGACAGCTGTTGTATCGTTAC 29329
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
| ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | ||
Sbjct 29330 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 29389
Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154
| || ||||||| || | ||||| ||
Sbjct 29390 GGTAAGGCCGCCATTGATTGGGGGTT 29415
Score = 75.2 bits (82), Expect = 2e-11
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364
|| || |||| |||||||||||||| |||||||||||||||||||||| ||| ||| ||
Sbjct 29640 GGTACACCTTATCCCTAAGTTACGGAGTCATTTTGCCGAGTTCCTTAATAATTGTTATC 29698
>seq198
Length=618
Score = 87.8 bits (96), Expect = 4e-15
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||| ||||| ||| ||||||||| ||||||||
Sbjct 260 ATCTGCACAGTTATTCCAATTTCACTGAGTCAATTATTGAGACAGCTGTTGTATCGTTAC 319
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
||||| ||| | | | | ||| | | || || ||| ||||||||||||||| | |||
Sbjct 320 ATCTTTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATA 379
Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154
| || |||||| || | ||||| ||
Sbjct 380 GATAAAGCCGCCATTCATTGGGGTTT 405
>seq26
Length=1225071
Score = 87.8 bits (96), Expect = 4e-15
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 53 GTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTA 112
|||| | || ||||||||||| ||| | | |||||||||| | |||||||||||||
Sbjct 430962 GTGCGTAGATTGTTACGCCTTTTGTGTAGATAAGAACTTACCCAATTAGGAATTTCGCTA 431021
Query 113 CCTTAGGACCGTTATAGTTACGGCCGCC 140
|||||| |||||||||||||| ||| ||
Sbjct 431022 CCTTAGAACCGTTATAGTTACAGCCACC 431049
>seq920
Length=30821
Score = 77.0 bits (84), Expect = 7e-12
Identities = 98/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | |||| |||||||| ||| | ||| ||||||||| ||||||||
Sbjct 30523 ATCTGCACAGCTATTATAATTTCACTGAGCCAATTATTGAGACAGCTGTTGTATCGTTAC 30464
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
| ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | |||
Sbjct 30463 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATA 30404
Query 129 GTTACGGCCGCCGTT 143
| || ||||||| ||
Sbjct 30403 GATAAGGCCGCCATT 30389
>seq4148
Length=19339
Score = 75.2 bits (82), Expect = 2e-11
Identities = 104/146 (71%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||||||| | || ||||||||| ||||||||
Sbjct 270 ATCTGCACAGCTATTCCAATTTCACCGAGCCAATCATTGAGACAGCTGTTGTATCGTTAC 329
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
| ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | ||
Sbjct 330 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 389
Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154
| || ||||||| || | || || ||
Sbjct 390 GGTAAGGCCGCCATTCATTGTGGGTT 415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062013541376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |