Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq3956 343 5e-92
seq2764 264 4e-68
seq24 257 6e-66
seq74 219 2e-54
seq569 176 2e-41
seq33854 163 1e-37
seq77 118 4e-24
seq652 105 2e-20
seq91 95.1 4e-17
seq28361 91.5 5e-16
seq685 91.5 5e-16
seq23461 84.2 8e-14
seq4891 80.6 1e-12
seq116 78.8 3e-12
seq31095 75.2 4e-11
>seq3956
Length=4762
Score = 343 bits (380), Expect = 5e-92
Identities = 406/543 (75%), Gaps = 15/543 (3%)
Strand=Plus/Minus
Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCC-TAGACCATCCAGTGCT 111
|| ||||||||||||||| || |||||| || |||||| ||| ||||||||||||
Sbjct 2875 GGTATTCGGAGTTTGGTTAGGTTTGGTAAGGCGGTAAGCCCCCCTAGCCCATCCAGTGCT 2816
Query 112 CTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTA 171
||||| || | | | ||| |||| ||| |||||||| |||||| |||||||||||||
Sbjct 2815 CTACCCCCCGTGACATACATGCGAGGCTCTACCTAAATAGATTTCGCGGAGAACCAGCTA 2756
Query 172 TCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCT 231
| | ||||||||||||||||||||||| ||||| |||||| ||||||||
Sbjct 2755 TTTCCCGGTTTGATTGGCCTTTCACCCCTAACCACAAGTCATCGGAGGCTTTTTCAACAG 2696
Query 232 AAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCA 291
| ||||||||||||| || ||||| ||||||||||| ||||| |||||||
Sbjct 2695 ACACCCGTTCGGTCCTCCAGTGCGTGTTACCGCACCTTCAACCTGCTCATGGCTAGATCA 2636
Query 292 CTTCGCTTCGGGTCTTGAT-CGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTAC 350
| | |||||||| |||| ||| ||||| |||||| ||| |||||||||||||| |
Sbjct 2635 CCGGGTTTCGGGTC-TGATCCGTCGAACTCAAGCGCCCTCTTCAGACTCGCTTTCGCTGC 2577
Query 351 GGCTACCCCACACGGGTTAACCTCG--CGACACAACGCAAACTCGCAGGCTCATTCTTCA 408
| || | || ||| |||| |||| ||||||| | || |||| | | |||| | ||
Sbjct 2576 GCCTCCACCTATCGGCTTAAGCTCGCTCGACACATC---AAGTCGCTGACCCATTATACA 2520
Query 409 AAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACA 468
||||| |||| |||| || || || ||| |||| || | ||||||| |
Sbjct 2519 AAAGGTACGCGGTCA------GCCAGAACGGATCTTGGCCTCCCACTGTTTGTAGGTATC 2466
Query 469 TGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTA 527
||||||||| ||| ||||||||||| | ||||| |||||||||||||||||||||||
Sbjct 2465 CGGTTTCAGGAACTGTTTCACTCCCCTCGTCGGGGTGCTTTTCACCTTTCCCTCACGGTA 2406
Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587
|| || | ||||||||| | ||||||| |||||||| || ||||||| ||| ||||
Sbjct 2405 CTGGTTCACTATCGGTCGCTGAGGAGTACTTAGGCTTGGAGGATGGTCCCCCCATGTTCA 2346
Query 588 CAC 590
||
Sbjct 2345 GAC 2343
>seq2764
Length=4463
Score = 264 bits (292), Expect = 4e-68
Identities = 345/470 (73%), Gaps = 27/470 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 3160 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 3101
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | |||||||| | ||| ||||||| ||||||| ||
Sbjct 3100 CCCTAACCACAACTCATCCGCTGATTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 3041
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| |||| |||||| |||| ||| |||||||||| | ||||||| | | | | |||
Sbjct 3040 TTCACCCAAGCTTCATCCTGGTCATAGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 2981
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370
|| | ||||||| |||||||||||||||||||| || || ||||
Sbjct 2980 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 2928
Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429
|| || ||| | | | |||| |||||||||||||| |||||||| |||| |
Sbjct 2927 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA----GA 2874
Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489
|| | ||| | |||| || | ||| || | ||||||| || |||||||||
Sbjct 2873 GCC--CAGGGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 2821
Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549
|||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||| |
Sbjct 2820 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 2761
Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 2760 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 2711
>seq24
Length=10012559
Score = 257 bits (284), Expect = 6e-66
Identities = 343/470 (73%), Gaps = 24/470 (5%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 3991521 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 3991580
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| ||
Sbjct 3991581 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 3991640
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| |||| |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 3991641 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 3991700
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370
|| | ||||||| |||||||||||||||||||| || || ||||
Sbjct 3991701 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 3991753
Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429
|| || ||| | | | |||| |||||||||||||| |||||||| || | |
Sbjct 3991754 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTTA---GAG 3991808
Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489
|||| || || |||| || | ||| || | ||||||| || |||||||||
Sbjct 3991809 TCCTAGTAG-----TCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 3991863
Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549
|||||| ||||| ||||||||| |||||||||| |||| | |||||| ||||||| |
Sbjct 3991864 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGATACTACTTCGCTATGGGTCACCCA 3991923
Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 3991924 GGAGTATTTAGCCTTGTAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 3991973
>seq74
Length=10145792
Score = 219 bits (242), Expect = 2e-54
Identities = 329/461 (71%), Gaps = 25/461 (5%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| |||||||||| |||||||||||||| | ||| || |||| ||||||
Sbjct 510055 GCTGCGCCTCAATGCATTTCAGGGAGAACCAGCTAGCTTTGGGTTCGAGTGGCATTTCAC 510114
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| ||
Sbjct 510115 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 510174
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| |||| |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 510175 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGATTCGGGTCCATAAGCAGTG 510234
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370
|| | ||||||| |||||| ||||||||||||| || || ||||
Sbjct 510235 ACAAT----TGCCCTATGAAGACTCGTTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 510287
Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429
|| || ||| | | | |||| | |||||||||||| |||||| |||| ||
Sbjct 510288 CCAAGC--CACTGCCTATGAGTCGCCGACTCATTCTTCAACAGGCACATGGTCA--GAGT 510343
Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489
| || || || | || ||| || | ||||||| || |||||||||
Sbjct 510344 CCAGTAA-------TCTCCTTCCACTACTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 510396
Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549
|||| | ||||| ||||||||| ||||||||||||||| | |||||| ||||||| |
Sbjct 510397 TCCCTGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATGGGTCACCCA 510456
Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590
||||||||||| ||| |||||||| | |||||||||
Sbjct 510457 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACAC 510497
>seq569
Length=4400913
Score = 176 bits (194), Expect = 2e-41
Identities = 320/460 (70%), Gaps = 25/460 (5%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || ||||||||||||||| || | | | | || | |||| ||||||
Sbjct 258939 GCTGCGCCTCAACGCATTTCGGGGAGAAACAACGAGCTCTGGATTCAAGTGGCATTTCAC 258880
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| ||
Sbjct 258879 CCCTAACCACAACTCATCCGCTAATTCTTCAACATTAGTCGGTTCGGACCTCCACTTAGT 258820
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || ||||| |||| |||||||| ||||| | ||||||| | | | | |||
Sbjct 258819 TTCATCCAACCTTCATCCTGGTCATGGATAAATCACCCAGGTTCGGGTCCATAAGCAGTG 258760
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370
|| | ||||||| |||| ||||||||| |||| || | || ||||
Sbjct 258759 ACAAT----TGCCCTATGAAGACTTACTTTCGCTA---CTACTCC-TATGGTTCCCTTAA 258708
Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429
|| || ||| | | | |||| |||||||||||||| ||||| || || | |
Sbjct 258707 CCAAGC--CACTGCCTATGAGTCGCTGGCTCATTCTTCAATAGGCATGCGGTTA---GAG 258653
Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489
|||| || || |||| || | || || | ||||||| || |||||| ||
Sbjct 258652 TCCTAGTAG-----TCTTCTCCCACTGCTTAGGAGCTTACGGTTTCATGTTCTATTTTAC 258598
Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549
|| ||| ||||| ||||||||||||||||||||||| | ||| || | ||||| |
Sbjct 258597 TCTCCGATGGGGGTTTCTTTCACCTTTCCCTCACGGTACTACTTCGCAATGGATCACCTA 258538
Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589
||||||||||| ||| |||||||| | ||||||||
Sbjct 258537 GGAGTATTTAGCCTTGCAAGGTGGTCCTTACTGATTCACA 258498
>seq33854
Length=1984
Score = 163 bits (180), Expect = 1e-37
Identities = 356/521 (68%), Gaps = 43/521 (8%)
Strand=Plus/Plus
Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146
||||| |||||| |||| ||||||||||||| || | ||| ||||| || |
Sbjct 936 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 995
Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206
||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| ||||
Sbjct 996 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 1055
Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265
| ||||||||| | ||| | || || ||||||||||||||||| | | ||| | |
Sbjct 1056 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 1115
Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACG 325
||||||||||| ||||| |||||| | | |||||||| || | | ||| |
Sbjct 1116 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AAATAGGAAGAACTATAAG 1174
Query 326 CCCTATTCGGACTCGCTTTCGCTA-CGGCTACCCCACACGGGTTAA-CCTCGCGACACAA 383
|||| || || | | | || |||| || | || |||| || | | ||
Sbjct 1175 ----ATTC-CAC---CTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTGTTCCCAT 1226
Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCA-CCTG-GTAC------CTA- 434
| ||||| | | ||| | ||||||| ||||||| | || || | |||
Sbjct 1227 TTC---CTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTGCGCTTTACTAA 1283
Query 435 ---------AAAGGCACT----TCAGCTC---CGACGGATTGTAGGCACATGGTTTCAGG 478
|||||| || || |||| |||| |||||| ||| | | |||||
Sbjct 1284 TAGAATAGTAAAGGCTCTAAGCTCCGCTCCTTCGACTGATTGTTCGCATCGGATCTCAGG 1343
Query 479 T--ACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGC 536
| ||||| ||||||| |||| |||||||||||||||||||||||||||| |||
Sbjct 1344 TTCTCTATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGC 1403
Query 537 TATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577
||||||||| |||| || ||||||||| ||||||||||
Sbjct 1404 TATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCC 1444
>seq77
Length=8408033
Score = 118 bits (130), Expect = 4e-24
Identities = 104/130 (80%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529
|| |||| || |||||||||||||| ||||| ||||||||| |||||||||||||||
Sbjct 2152214 GGATTCATGTTCTATTTCACTCCCCAATGGGGGTTCTTTTCACCCTTCCCTCACGGTACT 2152155
Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589
| |||||| ||||||| |||||||||||| ||| |||||||| | ||||||||
Sbjct 2152154 ACTTCGCTATGGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACA 2152095
Query 590 CGAAATTTCA 599
|| ||| ||
Sbjct 2152094 CGGGATTCCA 2152085
>seq652
Length=2384379
Score = 105 bits (116), Expect = 2e-20
Identities = 267/396 (67%), Gaps = 29/396 (7%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||| | ||| ||||||||||| | |||| |||||| | | ||| || |||| ||||||
Sbjct 211425 GCTACGCCTCAATGCATTTCGAGAAGAATCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 211366
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
|| || ||||| || ||| || | | |||||| | ||| ||||| ||||||| ||
Sbjct 211365 CCTTAACCACAACTCGTCCGCTAATTCTTCAACATCAGTCGGTTCAAACCTCCACTTAGT 211306
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| |||| |||||| ||| |||||||||||||| ||| ||| | | | | |||
Sbjct 211305 TTCACCCAAGCTTCATCCTAGTCATGGATAGATCACCCAAGTTCAGGTCCATAAGCAGTG 211246
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGG-----TTA 369
|| | ||| ||| |||| ||||||||||| | | | | ||| |||
Sbjct 211245 ACAAT----TGCCTTATGAAGACTTGCTTTCGCTACAGTT----CCGATGGGTTCCCTTA 211194
Query 370 ACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGG 428
||| || ||| | | | |||| |||||||||||| |||||||| |||| |
Sbjct 211193 ACCAAGC--CACTGCCTATGAGTCGCCAACTCATTCTTCAACAGGCACGCGGTCA--AAG 211138
Query 429 TACCTAAAAGGC-ACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTC 487
| |||| || | |||| || | ||| || | | ||||| | |||| ||
Sbjct 211137 T-CCTAGTAGTCTCCTTCCACTACTTAGGA------GCTTACGATTTCATATTCTATCTC 211085
Query 488 ACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCAC 523
|||||||| ||||| ||||||||| ||||||||
Sbjct 211084 ACTCCCCGATGGGGGTTCTTTTCACC-CTCCCTCAC 211050
>seq91
Length=4251426
Score = 95.1 bits (104), Expect = 4e-17
Identities = 110/147 (75%), Gaps = 1/147 (1%)
Strand=Plus/Plus
Query 160 GAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTC 219
||||||||||||| | || ||| ||||||||||||||||| ||||| |||||||
Sbjct 446449 GAGAACCAGCTATATCCAATATTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCATGT 446508
Query 220 AGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGCGCTTCAACCTGCC 278
| ||| | || | ||| |||||||||||| | | ||| | | |||||||||||
Sbjct 446509 ATTTTGCCACATTCGTGAATTCGGTCCTCCAAGGCTTGTTAGAGCTCTCTTCAACCTGCT 446568
Query 279 CATGGATAGATCACTTCGCTTCGGGTC 305
||||| ||||||| | | || |||||
Sbjct 446569 CATGGCTAGATCAGTCGGTTTTGGGTC 446595
>seq28361
Length=1991474
Score = 91.5 bits (100), Expect = 5e-16
Identities = 89/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| || || |||||||| |||||| |||||| | | ||| || |||| ||||||
Sbjct 604912 GCTGCGTCTCAACGCATTTCGAGGAGAATCAGCTAGCTCTGCGTTCGAGTGGCATTTCAC 604971
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251
||||| ||||| |||||| || | | |||||| | ||| |||||| |||||||
Sbjct 604972 CCCTAACCACAACTCATCCGCTAATTCTTCAACATCAGTCGGTTCGAACCTCCAC 605026
>seq685
Length=723526
Score = 91.5 bits (100), Expect = 5e-16
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 136 CGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCA 195
|||| |||| ||||||||||| |||||||||| || | | ||| || |||| |||||
Sbjct 77126 CGCTATACCTCAATGCATTTCGAGGAGAACCAGTTAGCTCTGGGTTCGAGTGGCATTTCA 77185
Query 196 CCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGG 255
|||||| ||||| |||| || | | ||||| | | | ||||||| || |||| |
Sbjct 77186 CCCCTAACCACAATTCATTTGCTAATTCTTCAATATCAATCGGTTCGGACCCCCACTTAG 77245
Query 256 TCTTACCCGCGCTTCAACCTGCCCATGGATAGA 288
| | |||| |||||| | || ||| ||||||
Sbjct 77246 TTTCACCCAAGCTTCATCTTGGTCATAGATAGA 77278
>seq23461
Length=104
Score = 84.2 bits (92), Expect = 8e-14
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565
|||||||| ||||||||||||||| | |||||| |||||| |||||||||||| |||
Sbjct 1 TTTTCACCCTTCCCTCACGGTACTACTTCGCTATGGGTCACTCAGGAGTATTTAGCCTTG 60
Query 566 ACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||||||| | |||||||||| ||| ||
Sbjct 61 TAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 94
>seq4891
Length=3437377
Score = 80.6 bits (88), Expect = 1e-12
Identities = 95/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 468 ATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTA 527
||||||||| || |||||||||||| | ||||| ||||||||| ||| |||||| ||
Sbjct 1166223 ATGGTTTCATGTTCTATTTCACTCCTTGGTGGGGGTTCTTTTCACCATTCTCTCACGATA 1166282
Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587
|| | ||| ||| |||| | ||| || ||| ||| |||| ||| | |||||
Sbjct 1166283 CTACTTCGCCATCAGTCATTCAAGAGCATGTAGCCTTGCAAGGTGATCCTTACTTATTCA 1166342
Query 588 CACGAAATT 596
||| |||||
Sbjct 1166343 CACAAAATT 1166351
>seq116
Length=10441785
Score = 78.8 bits (86), Expect = 3e-12
Identities = 150/220 (68%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
|||| ||| || | | ||| ||||||| ||||| | |||| || |||| ||||||
Sbjct 5715624 GCTGTGCCTCAACGTACTTCAAGGAGAACTAGCTAGGTCTGAGTTCGAGTGGCATTTCAC 5715683
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| | | | |||||| | | | |||| || |||||| ||
Sbjct 5715684 CCCTAACCACAACTCATCCGTTGATTCTTCAACATCAATCGGTTTGGATCTCCACTTAGT 5715743
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC--TTGATCGTG 314
|||| | | |||| ||| ||| | ||||||| | || | ||| | || |||
Sbjct 5715744 TTTACTCAAGTTTCATCCTAGTCATAAAAAGATCACACAGGTTTGAGTCCATAAATAGTG 5715803
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCT 354
|| | ||||||| ||||| ||||||||| ||||
Sbjct 5715804 ACAAT----TGCCCTATGAAGACTCACTTTCGCTATGGCT 5715839
>seq31095
Length=6821297
Score = 75.2 bits (82), Expect = 4e-11
Identities = 77/101 (76%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 473 TTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGT 532
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Sbjct 5314952 TTCATGTTCTGTTTTACTCCTCGATAGTGGTTCTTTTCGCCCTTCCCTCATGGTACTACT 5314893
Query 533 CCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGG 573
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Sbjct 5314892 TTGCTATCGGTCACCTGGGAATATTTAGCATTGTCAGGTGG 5314852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1816938829824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |