Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_031906.1
Length=198190
Score E
Sequences producing significant alignments: (Bits) Value
seq444 576 2e-159
seq10427 551 7e-152
seq32303 383 2e-101
seq31551 262 5e-65
seq31730 206 3e-48
seq231 187 3e-42
seq31523 178 2e-39
seq328 172 7e-38
seq111 156 5e-33
seq34854 145 1e-29
seq85 145 1e-29
seq155 122 1e-22
seq77 122 1e-22
seq203 116 5e-21
seq31544 113 6e-20
seq151 93.3 5e-14
seq134 93.3 5e-14
seq7573 82.4 1e-10
>seq444
Length=4271
Score = 576 bits (638), Expect = 2e-159
Identities = 717/971 (74%), Gaps = 12/971 (1%)
Strand=Plus/Minus
Query 188872 ACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCCTACGCTTCTCG-C 188930
||| | |||||||| || | || ||||| ||||| ||||||||||||| ||| | | |
Sbjct 1093 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTAC-CTTATTGAC 1035
Query 188931 TGCAACCATCTGCTTC-ATCGTCGCCTTTGTCGCTGCACCCCCTGTAGACATTGATGGCA 188989
||||| |||| || || |||| || | ||||| || || ||||| |||||||| |
Sbjct 1034 CGCAACT-TCTGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTA 976
Query 188990 TCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTG 189049
| || ||||| || |||| || || | || |||||||| || || || ||||| ||
Sbjct 975 TTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTA 916
Query 189050 TCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAGCCGCCTCACTCG 189109
| ||| | || || ||||| | || || ||||| ||||||||||| || || | |
Sbjct 915 TTCCTACTTCTGCAGCTATTGGATTGCATTTTTACCCAATCTGGGAAGCTGCATCCGTTG 856
Query 189110 ATGAGTGGCTCTACAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTTCCTCATCGGCA 189169
|||| ||||| |||||||| ||||||| |||| | || | ||||| | | ||
Sbjct 855 ATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGG-- 798
Query 189170 TCTACGCCT---ACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTT 189226
| || || | | |||||||||||||||||||| || |||||| |||||||||||||
Sbjct 797 TGTA-GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTT 739
Query 189227 GGATCTGCA-TTGCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTAT 189285
|||| ||| |||| || || || ||||||||||| || | || || || || |||||
Sbjct 738 GGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTAT 680
Query 189286 CCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAAC 189345
|| ||||||| || ||| ||||| | ||||| | || ||| ||| || ||||||
Sbjct 679 CCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAAC 620
Query 189346 TACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGA 189405
| ||| |||| ||||| || ||||||||||| || |||||||| || |||||| | ||
Sbjct 619 TTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGT 560
Query 189406 GTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCT 189465
|| || ||||| ||||| || || || || || ||||||||||| | || || |||
Sbjct 559 GTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCT 500
Query 189466 TCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAA 189525
|| | | |||||||| |||| || || || | ||||||| || || |||
Sbjct 499 AGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAA 440
Query 189526 GAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAA 189585
||||||||||| |||||||| || |||||||| || ||||| || || | || ||||||
Sbjct 439 GAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATTTTCCAA 380
Query 189586 TATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAGTCGTG 189645
||||| |||||||| || ||||| | || |||||| | || || ||||| || ||
Sbjct 379 TATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTA 320
Query 189646 GGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAATGGGTTCAAC 189705
||||| |||||||| || | || | || || ||||| |||||||| ||||| |||||
Sbjct 319 GGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAAT 260
Query 189706 TTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACGTTCTC 189765
||||| ||||| | ||||| ||||||| |||||| | || || ||||| || || |
Sbjct 259 TTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATT 200
Query 189766 AACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTCCCTCTT 189825
||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct 199 AACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTA 140
Query 189826 GATCTGGCAGC 189836
|| || || ||
Sbjct 139 GACCTAGCTGC 129
>seq10427
Length=4047
Score = 551 bits (610), Expect = 7e-152
Identities = 732/1014 (72%), Gaps = 2/1014 (0%)
Strand=Plus/Plus
Query 189987 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 190046
||||| || | ||||||||| | | || ||||| || ||||| |||||||||||
Sbjct 776 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 835
Query 190047 TTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 190106
|| | || ||||| ||| ||| |||| | || || ||| | || || || || |||
Sbjct 836 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 895
Query 190107 GCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGGTGCTAATTTTCTT 190166
| || ||||| || || ||| | || ||| || | || ||| |||||| |
Sbjct 896 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 955
Query 190167 ACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 190226
|| || || || || || |||||| || | | | |||||| | | |||| ||||||
Sbjct 956 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 1015
Query 190227 CCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTG 190286
|||||| | ||||| ||||| | ||| ||| | || || || |||||||||||
Sbjct 1016 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 1075
Query 190287 GCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG- 190345
|| |||||||| |||||||| |||| || || ||| | ||||| |||||||| || ||
Sbjct 1076 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 1135
Query 190346 TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGT 190405
||| || | | || ||||| ||||| || || ||||||||||| || |||||||||||
Sbjct 1136 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 1194
Query 190406 TAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTTCGG 190465
| ||||| || || || || || |||||||| |||||||||| ||||| || ||
Sbjct 1195 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 1254
Query 190466 TGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCTGAA 190525
||| || || || || || ||| ||||||| || || || || ||||| ||||| ||||
Sbjct 1255 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 1314
Query 190526 CCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCCA 190585
||| || || |||||||| || || ||| | ||||| | || || || | || || ||
Sbjct 1315 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 1374
Query 190586 TGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTAAAGC 190645
||||| |||||||| |||||||| | |||||||||||| ||||| || || ||
Sbjct 1375 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 1434
Query 190646 ATTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGTC 190705
|| || | || |||| ||||| || ||||| |||||||| || ||||| || |||||
Sbjct 1435 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 1494
Query 190706 TCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGT 190765
||||||||||| ||||| || ||||| | ||||| |||||||||||| | |||||
Sbjct 1495 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 1554
Query 190766 TCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCG 190825
|| || | ||| | |||| | | | || | | ||| | ||| | ||||| ||
Sbjct 1555 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTAGCTTTGAACCTACG 1614
Query 190826 TGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTTT 190885
||| |||||||| || ||||| || ||| | ||||| ||||||||||| || ||||||||
Sbjct 1615 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 1674
Query 190886 TTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATCA 190945
|| || |||||||| ||||| || |||||| ||||| | ||| |||| || |||||
Sbjct 1675 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 1734
Query 190946 ACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 190999
|| ||||| || || |||| || || || || | ||| | || ||||||||
Sbjct 1735 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 1788
>seq32303
Length=834
Score = 383 bits (424), Expect = 2e-101
Identities = 531/738 (72%), Gaps = 4/738 (1%)
Strand=Plus/Minus
Query 189987 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 190046
||||| || | ||||||||| | |||| || || || ||||| |||||||| ||
Sbjct 736 TTTGATATTATGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 677
Query 190047 TTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 190106
|| | || ||||| ||| ||| |||| | ||||| ||| | || || || || |||
Sbjct 676 CTATTGCTCTTTCCTTGTGCCTATTTCGCCTTAGGTGGTTGGTTCACAGGTACAACCTTT 617
Query 190107 GCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGG-TGCTAATTTTCT 190165
| || ||||| ||||| ||| | || ||| || | || || ||| | || | |
Sbjct 616 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAACTTCT-T 558
Query 190166 TACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 190225
|| || || || || || |||||| || | | | |||||| | | |||| |||||
Sbjct 557 AACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGG 498
Query 190226 TCCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGT 190285
||||||| | ||||| ||||| | ||| |||| | || || || ||| |||||||
Sbjct 497 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGCCAATTAGGTGGTCTGTGGACTTTTGT 438
Query 190286 GGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG 190345
||| |||||||| ||||||| ||||| || |||||| | ||||| |||||||| || ||
Sbjct 437 GGCTCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 378
Query 190346 -TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTG 190404
||| || | | || ||||| ||||| || || || |||||||| || ||||||||||
Sbjct 377 ATCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTG 319
Query 190405 TTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTTCG 190464
|| || || || || || || || ||||| || |||||||||| ||||| || |
Sbjct 318 TTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTG 259
Query 190465 GTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCTGA 190524
|||| ||||| || || |||||| |||| || || || || || ||||| ||||| |||
Sbjct 258 GTGTAGCAGCTATATTTCGCTTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGA 199
Query 190525 ACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCC 190584
|||| || || |||||||| ||||| ||| | |||| | || || || | || || |
Sbjct 198 ACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTCCTATGCGCTATTC 139
Query 190585 ATGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTAAAG 190644
|||||| || ||||| |||||||| | |||||||||||| ||||| || || |
Sbjct 138 ATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 79
Query 190645 CATTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGT 190704
| || || | || |||| ||||| || ||||| |||||||| || || || || ||||
Sbjct 78 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 19
Query 190705 CTCAAATCTTTGGTGTTG 190722
| ||||||||||| ||||
Sbjct 18 CCCAAATCTTTGGGGTTG 1
>seq31551
Length=1713
Score = 262 bits (290), Expect = 5e-65
Identities = 320/433 (74%), Gaps = 9/433 (2%)
Strand=Plus/Minus
Query 189412 GGTGT-CTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACT 189470
||||| |||||| || || || ||| || ||||||||||| | || |||||| |
Sbjct 1156 GGTGTACTTCGGCGGCTCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 1097
Query 189471 GGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGA 189530
| | | |||||||| |||| || || || ||||||| || || ||||||||
Sbjct 1096 GATCAGGGAAACCACAGAAAATGAATCTGCTAATGTAGGTTACAGATTCGGTCAAGAAGA 1037
Query 189531 AGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATATGC 189590
|||||| || || ||||| ||||||||||| ||||| || || | ||||||||||||||
Sbjct 1036 AGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 977
Query 189591 ATCGT-TCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAGTCGTGGGTA 189649
| || ||||||| || ||||| | || |||||||| ||||| ||||| || || ||||
Sbjct 976 -TAGTGTCAACAATTCTCGTTCCTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTA 918
Query 189650 TCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAATGGGTTCAACTTCA 189709
||||||| || || | || | ||||||||||| || || | || || ||||| ||||
Sbjct 917 TCTGGTTCACTGCTTTAGGTATTAGCACCATGGCTTTTCACTTAAACGGTTTCAATTTCA 858
Query 189710 ATCAATCCATTCTTGATGGTC------AAGGTCGTGTTCTGAACACATGGGCAGACGTTC 189763
| ||||| | ||||| ||| |||||| ||| | || || ||||| || |
Sbjct 857 ACCAATCTGTAGTTGATAGTCAAGGAAAAGGTCATGTAATTAATACCTGGGCTGATCTCA 798
Query 189764 TCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTCCCTC 189823
| ||||||||| |||||||||||||| |||||||| ||||| ||||| |||||||| |
Sbjct 797 TTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCCC 738
Query 189824 TTGATCTGGCAGC 189836
| || || || ||
Sbjct 737 TAGACCTAGCTGC 725
>seq31730
Length=297
Score = 206 bits (228), Expect = 3e-48
Identities = 219/286 (77%), Gaps = 2/286 (1%)
Strand=Plus/Plus
Query 189181 ATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTTGGATCTGC-ATTGC 189239
|||||||||||||||||||| || |||||| |||||||| |||||||| ||| ||||
Sbjct 1 ATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGC 59
Query 189240 TTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGG 189299
|| || || ||||||||||| || | || || || || |||| || ||||||||||
Sbjct 60 ATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGG 119
Query 189300 TTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTACATGCTTGTCTT 189359
||| ||||| | ||||| | || || ||| || ||||||| |||| |||| ||
Sbjct 120 AAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATT 179
Query 189360 CCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCAGGTGTCTT 189419
||| || |||||||||||||| |||||||| || |||||| | || || || ||||| ||
Sbjct 180 CCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATT 239
Query 189420 CGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCT 189465
||| || || || ||| || ||||||||||| | || ||||||
Sbjct 240 CGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCT 285
>seq231
Length=1485859
Score = 187 bits (206), Expect = 3e-42
Identities = 229/313 (73%), Gaps = 0/313 (0%)
Strand=Plus/Minus
Query 190656 ACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGTCTCAAATCTTT 190715
|| |||| ||||| |||||||| |||||||| || || || || ||||| |||||||||
Sbjct 476710 ACTCAAGCTGAAGAAACCTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 476651
Query 190716 GGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATG 190775
|| ||||| || ||||| | ||||| ||||| |||||| | ||||| || || |
Sbjct 476650 GGGGTTGCTTTTTCCAATAAATGTTGGTTACATTTGTTTATGTTATTTGTACCGGTAACC 476591
Query 190776 GGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 190835
||| | |||| | | | || | | ||||| ||| | ||||| ||||| ||| ||
Sbjct 476590 GGTTTATGGATGAGTGCTCTTGGAGTGGTCGGTCTGGCTTTGAACCTACGTGCCTATAAC 476531
Query 190836 TTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTTTACACAAAA 190895
|| || | ||| |||||| | |||||||||||||| || || || ||||| |||| |||
Sbjct 476530 TTCGTTTGCCAGGAGATCTGTGCAGCAGAAGATCCTGAATTTGAAACTTTCTACATCAAA 476471
Query 190896 AATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATCAACCCCATGAG 190955
||||| || || || ||| || || || | | | |||| || |||||||| |||||
Sbjct 476470 AATATTCTCTTAAACGAAAGTATTTGTGCTTAGATGGCGGCTCAAGATCAACCTCATGAA 476411
Query 190956 AATTTTGTATTTC 190968
|| || ||||||
Sbjct 476410 AACCTTATATTTC 476398
>seq31523
Length=225
Score = 178 bits (196), Expect = 2e-39
Identities = 160/201 (80%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 189508 GGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTC 189567
||||||| || || ||||| |||||||| || || ||||| ||||||||||| |||||
Sbjct 25 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 84
Query 189568 GGTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTC 189627
|| || | |||||||||||||| |||||||| || ||||| | |||||||||||
Sbjct 85 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTA 144
Query 189628 GCTGCCTGGCCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTC 189687
||||| ||||| || || ||||||||||| || || | || ||||||| ||||| |||
Sbjct 145 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTC 204
Query 189688 AACCTCAATGGGTTCAACTTC 189708
||||| ||||| ||||| |||
Sbjct 205 AACCTAAATGGTTTCAATTTC 225
>seq328
Length=921196
Score = 172 bits (190), Expect = 7e-38
Identities = 202/273 (74%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 190685 CACTGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTT 190744
||| || || || || ||||| ||||||||||| ||||| || ||||| | |||||
Sbjct 671670 CACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTT 671611
Query 190745 GCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTAT 190804
|||||||||||| | ||||| || || | ||| | |||| | | | || | |
Sbjct 671610 ACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGT 671551
Query 190805 TGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGA 190864
||||| ||||| ||||| ||||| |||||||| || ||||| |||||| | ||||| ||
Sbjct 671550 CGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAGATCCGTGCAGCGGA 671491
Query 190865 AGATCCAGAGTTCGAGACTTTTTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTC 190924
|||||| || || || ||||| ||||| |||||||| || || || ||||| ||||| |
Sbjct 671490 AGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACAAAGGTATTCGTGC 671431
Query 190925 ATGGTTGGCACCTGTTGATCAACCCCATGAGAA 190957
||| |||| || ||||| || ||||| ||
Sbjct 671430 TTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 671398
>seq111
Length=3019079
Score = 156 bits (172), Expect = 5e-33
Identities = 196/269 (73%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 190731 AATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCT 190790
||||| | ||||| |||||||||||| | ||||| || || | ||| | |||| |
Sbjct 6788 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT 6729
Query 190791 TCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAG 190850
| | || | | ||||| ||||| ||||| ||||| |||||||| || ||||| |||
Sbjct 6728 GCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAG 6669
Query 190851 ATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTTTACACAAAAAATATACTTTTGAAT 190910
||| | ||||| |||||||| || || || ||||| ||||| |||||||| || || ||
Sbjct 6668 ATCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAAC 6609
Query 190911 GAAGGTCTTCGTTCATGGTTGGCACCTGTTGATCAACCCCATGAGAATTTTGTATTTCCA 190970
|||||| ||||| | ||| |||| || ||||| || ||||| || || |||| ||
Sbjct 6608 GAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 6549
Query 190971 GAAGAAGTATTGCCAAGAGGCAACGCTCT 190999
|| || || | || | || ||| ||||
Sbjct 6548 GAGGAGGTTCTACCCCGTGGAAACCCTCT 6520
>seq34854
Length=328
Score = 145 bits (160), Expect = 1e-29
Identities = 192/261 (74%), Gaps = 4/261 (2%)
Strand=Plus/Plus
Query 188878 AACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCCTACGCTTCTCG-CTGCAAC 188936
|||||||| || | || ||||| ||||| ||||||||||||| ||| | | | |||||
Sbjct 59 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTAC-CTTATTGACCGCAAC 117
Query 188937 CATCTGC-TTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAGACATTGATGGCATCCGCG 188995
|||| || || | ||||| | ||||| || || ||||| |||||||| || || |
Sbjct 118 T-TCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTG 176
Query 188996 AACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCTT 189055
|||| || |||| || || | ||||||||||| || ||||| ||||| || | |||
Sbjct 177 AACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCGGGTGCCATTATTCCTA 236
Query 189056 CATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAGCCGCCTCACTCGATGAGT 189115
| || || || ||| | || || ||||| || |||||||| || || | ||||| |
Sbjct 237 CTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCGGCATCTGTTGATGAAT 296
Query 189116 GGCTCTACAACGGTGGTCCTT 189136
|| | |||||||| |||||||
Sbjct 297 GGTTATACAACGGCGGTCCTT 317
>seq85
Length=5226098
Score = 145 bits (160), Expect = 1e-29
Identities = 130/163 (80%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 189671 TCAGCACCATGGCATTCAACCTCAATGGGTTCAACTTCAATCAATCCATTCTTGATGGTC 189730
||||||| ||||| |||||||| ||||| ||||| ||||| |||||| | ||||| |||
Sbjct 1123349 TCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTC 1123290
Query 189731 AAGGTCGTGTTCTGAACACATGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAG 189790
|||||||||| | || ||||||| || || | || ||||| |||||||||||||
Sbjct 1123289 AAGGTCGTGTAATTAATACATGGGTTGATATTATTAATTGTGCTAACCTTGGTATGGAAG 1123230
Query 189791 TCATGCATGAGCGTAACGCTCACAACTTCCCTCTTGATCTGGC 189833
| |||||||| |||| ||||| ||||||||||| || || ||
Sbjct 1123229 TTATGCATGAATGTAATGCTCATAACTTCCCTCTAGACCTAGC 1123187
>seq155
Length=2184526
Score = 122 bits (134), Expect = 1e-22
Identities = 337/510 (66%), Gaps = 15/510 (3%)
Strand=Plus/Minus
Query 190035 GGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACT 190094
||| |||| || ||| || ||||| ||| ||| |||| | |||| ||||| ||
Sbjct 253089 GGTCGGTCCGGTCAACTGCTCTTTCCTTGTGCATATTTCGCTTTAAGTGGTTGGCTCACA 253030
Query 190095 GGCACGACGTTTGCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGGT 190154
|| || || |||| || |||| || || | | | || ||| || | || ||
Sbjct 253029 GGTACAACCTTTGTAACTTCACGGTATACTCATGAATTGGCTAGTTCCTATTTGGACGGA 252970
Query 190155 GCTAATTTTCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTT 190214
||| || | || || || || | || |||| | || | | | ||| || | |
Sbjct 252969 TGTAACTTCTTAACCGCCGCAGTTTTTACTCCTGTTAATAGTTTAGCACATCCTTTGTTG 252910
Query 190215 CTACTTTGGGGTCCTGAATCTCAAGGCGATTTCG-TCAGGTGGATCCAACTTGGGGGACT 190273
|||| |||| || ||| | ||||| ||||| ||| || ||| | || | |
Sbjct 252909 TTACTATGGGATCTTGATGCACAAGGAGATTTTACTCATGT-----CAATTAGGCGATCC 252855
Query 190274 CTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTT 190333
||| |||||||||| ||||| || ||||| ||||| || |||||| | ||||| ||
Sbjct 252854 GTGGACTTTTGTGGCTCTCCATGGCGCTTTTAAACTAATAGGTTTCATG-TACGTCAATT 252796
Query 190334 TGAACTGGCACG-TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTA 190392
|||||| || | ||| || | | || ||||| ||||| || | |||| |||||| |
Sbjct 252795 TGAACTTGCTCAATCTGTTCAAT-TGCGACCTTATAATGCAATCACATTCTATGGTCCAA 252737
Query 190393 TCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCG 190452
| | ||||||||| || || || || || || ||||| || ||||||||||| |
Sbjct 252736 TTGTTGTTTTTGTA-----CTCTCA-ATTTATCCGCTAGGTCAGTCCAGTTGGTTCTTTG 252683
Query 190453 CGCCATCCTTCGGTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATA 190512
| || || ||| | ||||| || || |||| || | | || || || || |||
Sbjct 252682 CACCTAATTTTGGTATAGCAGCTATATTTTGCTTTATCATTTCTTTCCAAGGGTTTCATT 252623
Query 190513 ACTGGACGCTGAACCCCTTCCACATGATGG 190542
| |||| ||||||| || || |||||||
Sbjct 252622 ATCGGACATTGAACCCATTTCAAATGATGG 252593
>seq77
Length=8408033
Score = 122 bits (134), Expect = 1e-22
Identities = 211/301 (70%), Gaps = 8/301 (3%)
Strand=Plus/Plus
Query 188962 GCTGCACCCCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTAT 189021
||||| || || |||| |||||||| || ||| |||| | | | || || | |||
Sbjct 2698701 GCTGCTCCTCCAATAGATATTGATGGTATTCGCAAACCTATTTCCAGATCTCTACTTTAT 2698760
Query 189022 GGAAACAACATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTC 189081
|||||||| || ||||| ||||| || | || | || || || ||| | || |
Sbjct 2698761 GGAAACAATATTATCTCCGGTGCCATTATTCCAACTTCTTCAGCTATAGGTTTGCATATT 2698820
Query 189082 TACCCCATCTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAA 189141
||||| || | |||||| | ||| | ||||| ||| | |||||||| ||||||| |
Sbjct 2698821 TACCCAATGTAGGAAGCATCATCAGTTGATGAATGGTTATACAACGGCGGTCCTTATGAG 2698880
Query 189142 CTGGTAGTCTTCCACTTCCTCATCGGCATCTACGC---CTACATGGGTCGTGAGTGGGAA 189198
|| | || | |||||| | | || | || || |||||||||||||||||||||
Sbjct 2698881 CTAATTGTACTACACTTCTTACTTGG--TGTA-GCTTGTTACATGGGTCGTGAGTGGGAA 2698937
Query 189199 CTCTCTTACCGTCTCGGTATGCGTCCTTGGATCTGC-ATTGCTTACTCTGCACCTGTTGC 189257
|| || ||||| |||||| | ||||||| ||| |||| || || || ||||||||
Sbjct 2698938 CTTAGTTTTCGTCTAGGTATGTGCTCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGC 2698996
Query 189258 A 189258
|
Sbjct 2698997 A 2698997
>seq203
Length=8626763
Score = 116 bits (128), Expect = 5e-21
Identities = 159/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 189178 TACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTTGGATCTGCATT 189237
||||||||| ||||| |||||| || |||||| |||||||| |||||||| ||
Sbjct 3756518 TACATGGGTTATGAGTAGGAACTTAGTTTCCGTCTAGGTATGCGCCCTTGGATTGTTGTT 3756459
Query 189238 GCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAA 189297
|| || || || || |||||| | || | || || || || |||| || ||||||||
Sbjct 3756458 GCATATTCAGCTCCGGTTGCAACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAA 3756399
Query 189298 GGTTCTTTCTCTGACGCAATGCCCTTGGGTAT---CAGTGGAACCTTCAACTACATGCTT 189354
|| || | ||| | ||||| | || || ||||| | ||||| | |||| ||
Sbjct 3756398 GGAAGATTTTATGATGATATGCCTCTAGGAATTTCCAGTG---CTTTCAATTTCATGATT 3756342
Query 189355 GTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCA 189395
|| |||||||| |||||||||||||| ||| | || || ||
Sbjct 3756341 GTATTCCAAGCTGAGCACAACATCCTTATGTATCCATTGCA 3756301
>seq31544
Length=164
Score = 113 bits (124), Expect = 6e-20
Identities = 100/125 (80%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 189712 CAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACGTTCTCAACCGT 189771
|||||| | ||||| ||||||||||||| | || || ||||| || || | || |||
Sbjct 2 CAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGT 61
Query 189772 GCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTCCCTCTTGATCTG 189831
||| ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||
Sbjct 62 GCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 121
Query 189832 GCAGC 189836
|| ||
Sbjct 122 GCTGC 126
>seq151
Length=2833985
Score = 93.3 bits (102), Expect = 5e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 189529 GAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATAT 189588
|||||||| || || ||||| ||||||||||| ||||| || || | ||||||| ||||
Sbjct 2328018 GAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCTATAT 2328077
Query 189589 GCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGC 189632
|| |||||||| || ||||| | ||||||||||| |||||
Sbjct 2328078 GCTAGTTTCAACAATTCTCGTTCGTTACACTTCTTCCTAGCTGC 2328121
>seq134
Length=15115857
Score = 93.3 bits (102), Expect = 5e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 189694 AATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGG 189753
||||| ||| | |||||||||||||| ||||| | ||||||||||| | || | ||
Sbjct 3767265 AATGGTTTCTATTTCAATCAATCCATAGTTGATAGCCAAGGTCGTGTAATTAATATGCGG 3767206
Query 189754 GCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCAC 189813
| || || | || ||||| |||||||| ||||| | ||||| ||||| |||||
Sbjct 3767205 GGTGATATTATTAATTGTGCTAACCTTGGTATAGAAGTTACACATGAACGTAATGCTCAT 3767146
Query 189814 AACTTCCCTCTTGA 189827
||||||||||| ||
Sbjct 3767145 AACTTCCCTCTAGA 3767132
>seq7573
Length=101
Score = 82.4 bits (90), Expect = 1e-10
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 189671 TCAGCACCATGGCATTCAACCTCAATGGGTTCAACTTCAATCAATCCATTCTTGATGGTC 189730
||||||| ||||| || ||||| ||||| ||||| ||||| |||||| | ||||| |||
Sbjct 96 TCAGCACTATGGCTTTAAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTC 37
Query 189731 AAGGTCGTGTTCTGAACACATGGGCAGA 189758
|||||||||| | || || ||||| ||
Sbjct 36 AAGGTCGTGTAATTAATACCTGGGCTGA 9
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633791683824000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |