Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq9208 398 1e-108 seq7644 327 2e-87 seq17453 131 3e-28 seq15254 93.3 6e-17 >seq9208 Length=86431 Score = 398 bits (440), Expect = 1e-108 Identities = 244/256 (95%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 45223 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 45166 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45165 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 45106 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 45105 CCCGGGCCTATCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 45046 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 45045 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 44986 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 44985 GCCATAGTCCCTCTAA 44970 >seq7644 Length=985120 Score = 327 bits (362), Expect = 2e-87 Identities = 228/256 (89%), Gaps = 10/256 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||| | Sbjct 799317 GTACAAAGGGCAGGGATGTAGTCAACGCGAGCT-GATGACTTGCGCTTACTAGGAATTCC 799259 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 | |||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 799258 C-CGTTGAAGACCAACAATTACAATGATCTATCCCCATCACGATGAAA-------GATTA 799207 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 | || ||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 799206 CTCGAGCCTATCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 799147 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 | ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 799146 CGTAGAGCATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 799087 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 799086 GCCATAGTCCCTCTAA 799071 >seq17453 Length=238 Score = 131 bits (144), Expect = 3e-28 Identities = 149/196 (76%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 45 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 102 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 103 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 162 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 163 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 222 Query 180 GCCCAGAACATCTAAG 195 |||| | ||||||||| Sbjct 223 GCCCCGGACATCTAAG 238 >seq15254 Length=220 Score = 93.3 bits (102), Expect = 6e-17 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 211 TCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 153 Query 221 AAACTTCCGTGGC 233 || || ||||| Sbjct 152 AATCTCGGGTGGC 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751771972215