Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq26111 513 3e-143 seq9208 239 8e-61 seq7644 233 4e-59 seq20953 172 1e-40 seq2300 143 5e-32 seq12252 131 3e-28 >seq26111 Length=480 Score = 513 bits (568), Expect = 3e-143 Identities = 302/314 (96%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| Sbjct 428 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGCGTGTCGGGGA 369 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 368 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 309 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 308 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 249 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 248 AATGATTAATAGGGATAGTCGGGGCCGTCCGTATTCAATTGTCAGAGGTGAAATTCTTGG 189 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 188 ATTTATTGAAGACGAACTACTGCGAAAGCATTCGGCAAGGATGTTTTCATTAATCAGTGA 129 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 128 ACGAAAGTTAGGGG 115 >seq9208 Length=86431 Score = 239 bits (264), Expect = 8e-61 Identities = 204/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 44330 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 44389 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| |||||| | ||| || |||||||| Sbjct 44390 GGGATAACATCATAGGATTT-CGGTCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGAT 44448 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 44449 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 44508 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 44509 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 44567 Query 311 GTTAGGGG 318 ||| |||| Sbjct 44568 GTTGGGGG 44575 >seq7644 Length=985120 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 798431 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 798490 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| |||||| | ||| || |||||||| Sbjct 798491 GGGATAACATCATAGGATTT-CGGTCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGAT 798549 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 798550 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 798609 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || ||||||||||||| |||||||| |||||||| Sbjct 798610 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTTATTAATCA-AGAACGAAA 798668 Query 311 GTTAGGGG 318 ||| |||| Sbjct 798669 GTTGGGGG 798676 >seq20953 Length=281 Score = 172 bits (190), Expect = 1e-40 Identities = 207/277 (75%), Gaps = 6/277 (2%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 276 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 217 Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||||||| || | |||| ||| |||||||| ||||||||| |||| Sbjct 216 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 158 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| | || | | |||||||| ||||| | |||||| | Sbjct 157 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 98 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| | |||||||||||||||||| ||||| || | |||||||| Sbjct 97 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 38 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 || ||||| |||||||||||||||| ||||||||| Sbjct 37 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAG 2 >seq2300 Length=13124 Score = 143 bits (158), Expect = 5e-32 Identities = 148/190 (78%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCA 129 ||| ||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||| Sbjct 12935 ACTGTTACTTTGAGGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCA 12994 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||| |||| | |||||| | | |||||||| |||||| | ||| || ||||||| Sbjct 12995 TGGGATAACATCATAGGA-TTTCAGTTCTATTCTGTTGGCCTTCGGGATCGGAGTAATGA 13053 Query 190 TTAATAGGG--ATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||| |||| || ||||||| | |||| || ||||||||||||||| ||||||| Sbjct 13054 TTAACAGGGACATGCTCGGGGGCATTCATATTTCATAGTCAGAGGTGAAATTTTTGGATT 13113 Query 248 TATTGAAGAC 257 ||| ||||| Sbjct 13114 TATGAAAGAC 13123 >seq12252 Length=202 Score = 131 bits (144), Expect = 3e-28 Identities = 145/190 (76%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCA 129 ||| ||||||||| ||||||||||| |||||||| | || |||| | ||||||||||| Sbjct 190 ACTGTTACTTTGAGGAAATTAGAGTGCTCAAAGCAAGTCTACGCTCTGTATACATTAGCA 131 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||| |||| | |||||| | | ||| |||| |||||| | ||| || ||||||| Sbjct 130 TGGGATAACATCATAGGATTT-CAGTTATATTCTGTTGGCCTTCGGGATCGGAGTAATGA 72 Query 190 TTAATAGGGATAG--TCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||| ||||| | |||||| | |||| || ||||||||||||||| ||||||| Sbjct 71 TTAACAGGGACATGCTCGGGGCCATTCATATTTCATAGTCAGAGGTGAAATTTTTGGATT 12 Query 248 TATTGAAGAC 257 ||| ||||| Sbjct 11 TATGAAAGAC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914913533248