Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq7998 141 1e-31 seq8453 127 3e-27 seq7873 114 2e-23 seq8026 109 8e-22 seq6950 109 8e-22 seq1816 95.1 2e-17 >seq7998 Length=612300 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 23659 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 23601 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 23600 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 23554 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 23553 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 23500 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 23499 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 23440 Query 246 GTA 248 ||| Sbjct 23439 GTA 23437 >seq8453 Length=8773 Score = 127 bits (140), Expect = 3e-27 Identities = 174/243 (72%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||| Sbjct 2896 CCTTCCAGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCTGAGACT 2954 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| ||||||| || | || || |||||||| || Sbjct 2955 TGTGTTTTTGGTAAACAATCACCCGGGCCTGGTCACTGCGACCCCCT------------- 3001 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 3002 TTGTA----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 3055 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || || ||| ||||||| ||||| |||||||||||| ||| | Sbjct 3056 TAGAGAGAGTTGTCTCGCACCCCTAGGTATTCTTTACCTACCCACCTGTGTCGATTTCGG 3115 Query 246 GTA 248 ||| Sbjct 3116 GTA 3118 >seq7873 Length=870289 Score = 114 bits (126), Expect = 2e-23 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||||| |||||||||| ||||||| | |||| | Sbjct 80339 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 80280 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||||||||| |||||||||||||||| |||| Sbjct 80279 CGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 80232 >seq8026 Length=978627 Score = 109 bits (120), Expect = 8e-22 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||| ||||||||||||| |||||||||| ||||||| | |||| | Sbjct 90760 GGCACCCCTTCTCCTGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 90819 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||||||||| |||||||||||||||| |||| Sbjct 90820 CGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 90867 >seq6950 Length=1016052 Score = 109 bits (120), Expect = 8e-22 Identities = 159/225 (71%), Gaps = 20/225 (9%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | |||| | ||| | |||| Sbjct 620567 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAT-GACTTTACGGAGACC 620625 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 620626 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 620672 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 620673 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 620726 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCAC 230 || | |||| | || | ||| ||||||||||||| |||| Sbjct 620727 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 620771 >seq1816 Length=529132 Score = 95.1 bits (104), Expect = 2e-17 Identities = 129/182 (71%), Gaps = 20/182 (11%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | |||| || ||| | |||| Sbjct 368652 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTTTGTGGAGACC 368594 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| | | Sbjct 368593 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC-------------CCCT 368547 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || | | ||||||||||||||| |||||||||||| |||||||||| ||||| Sbjct 368546 TTGT------GAGGAGGCACCCCTTCTCCCAAAGTTACGGGGCTATTTTGCCGAGTTCCT 368493 Query 186 TA 187 || Sbjct 368492 TA 368491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694189438173