Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq7998 269 7e-70 seq8453 224 2e-56 seq6950 199 1e-48 seq31300 116 9e-24 seq1702 102 2e-19 seq1816 84.2 6e-14 seq7873 82.4 2e-13 seq8026 77.0 8e-12 seq11985 73.4 1e-10 >seq7998 Length=612300 Score = 269 bits (298), Expect = 7e-70 Identities = 308/418 (74%), Gaps = 27/418 (6%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 23849 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 23790 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23789 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 23730 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | | || | ||| Sbjct 23729 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 23670 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 23669 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 23610 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 23609 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 23556 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 23555 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 23513 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 23512 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 23455 >seq8453 Length=8773 Score = 224 bits (248), Expect = 2e-56 Identities = 298/416 (72%), Gaps = 27/416 (6%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| || | |||||| ||| ||| ||||||| ||| |||||||| Sbjct 2708 ATCTTCACAGACATGTTTGTTTCACCGAGCCTCTCTCTGAGACAGTGCCCAGATCGTTAC 2767 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2768 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 2827 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTAGC---TAACCCCA 190 |||| |||||||||| |||||||||||| || ||| | | || | | | ||| Sbjct 2828 GTTAAGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAAGTCACCAAC 2887 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 | || ||||||| |||| |||||||||||| ||| |||| | ||| || ||||| Sbjct 2888 TTCCTTGACCTTCCAGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGC 2947 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCT 310 ||| ||||||||| |||||| || | |||||||| || ||||| | | Sbjct 2948 TGAGACTTGTGTTTTTGGTAAACAATCACCCGGGCCTGGTCACTGCGACCCCCTT---TG 3004 Query 311 TACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTT 370 || ||| ||| | ||||||||||||||||||| || |||| Sbjct 3005 TAAGGA--------------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTT 3044 Query 371 GCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||| |||||||| ||||| |||| | ||| |||||||| |||| | |||| Sbjct 3045 GCCGAGTTCCTTAGAGAGAGTTGTCTCGCACCCCTAGGTATTCTTTACCTACCCAC 3100 >seq6950 Length=1016052 Score = 199 bits (220), Expect = 1e-48 Identities = 253/352 (72%), Gaps = 27/352 (8%) Strand=Plus/Plus Query 79 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTA 138 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct 620443 TTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAGCGTTATAGTTA 620502 Query 139 CGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCCCATCAA 194 ||||||||||| ||||| ||||| || ||| | | | || | ||| | Sbjct 620503 CGGCCGCCGTTCACCGGTGCTTCAGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCC 620562 Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 || |||||||||||| |||||||||||| ||| |||| | ||| | ||| | ||| Sbjct 620563 TTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTATGACTTTACGGAG 620622 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACG 314 |||||||||| ||||||||||| |||||||| || ||||| ||| Sbjct 620623 ACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CCCTTTGT 620676 Query 315 GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCT 374 ||| | ||| | ||||||||||||||||||| || ||||||| Sbjct 620677 GAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCG 620719 Query 375 AGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 620720 AGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 620771 >seq31300 Length=1457403 Score = 116 bits (128), Expect = 9e-24 Identities = 136/181 (75%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 112 TTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC 171 |||||||||||||||| |||| ||||| ||||||||||||||||||||| || | ||| Sbjct 880795 TTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGC 880854 Query 172 TTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATA 231 || | || | || || | ||||||| ||||||| || | |||| || ||||| Sbjct 880855 TTAGAACA--CTT-CTCCTTC---TGACCTTCCAGCACCGGACAAGTGTCAGACTCTATA 880908 Query 232 CGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTA 291 | || || | || ||||||| ||||||||||||||| |||||| | ||||||| Sbjct 880909 CATCGTGTTACCACTTAGCAGAGTCTTGTGTTTTTAATAAATAGTCGCTACCCCCTGGTA 880968 Query 292 T 292 | Sbjct 880969 T 880969 >seq1702 Length=719121 Score = 102 bits (112), Expect = 2e-19 Identities = 112/148 (76%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 19 TCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCA 78 |||||| || |||||||||| ||| ||| |||||| ||| ||||||||||| Sbjct 376625 TCACAGACATGTCAATTTCACCGAGCCTCTCTCTAAGACAGTGCCTAGATCGTTACGCCT 376566 Query 79 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTA 138 || | |||| ||| |||| ||| |||||||||| ||||||||| | | |||| |||| Sbjct 376565 TTTAAGTGGGTCAGAA-TTACTCGATAAGGAATTTCACTACCTTAGAATCATTATAGTTA 376507 Query 139 CGGCCGCCGTTTACCGGGGCTTCGATCA 166 |||| || || ||| ||| |||||||| Sbjct 376506 TGGCCACCATTCACCAGGGATTCGATCA 376479 >seq1816 Length=529132 Score = 84.2 bits (92), Expect = 6e-14 Identities = 145/215 (67%), Gaps = 23/215 (11%) Strand=Plus/Minus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 || |||||||||||| |||||||||||| ||| |||| | ||| || |||| ||| Sbjct 368656 TTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGTGGAG 368597 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACG 314 |||||||||| ||||||||||| |||||||| || ||||| ||| Sbjct 368596 ACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CCCTTTGT 368543 Query 315 GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCT 374 ||| | ||| | ||||||||| ||||||||| || ||||||| Sbjct 368542 GAGGA-----------------GGCACCCCTTCTCCCAAAGTTACGGGGCTATTTTGCCG 368500 Query 375 AGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGT 409 |||||||| ||||| |||| || ||| ||| Sbjct 368499 AGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGT 368465 >seq7873 Length=870289 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| | ||||||||||||||||||| || ||||||| |||||||| ||||| ||| Sbjct 80339 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 80280 Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | || ||| ||||||||||||| | |||| Sbjct 80279 CGCGCCCCTAGGTATTCTCTACCTACCCAC 80250 >seq8026 Length=978627 Score = 77.0 bits (84), Expect = 8e-12 Identities = 71/90 (79%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| | |||||||| |||||||||| || ||||||| |||||||| ||||| ||| Sbjct 90760 GGCACCCCTTCTCCTGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 90819 Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | || ||| ||||||||||||| | |||| Sbjct 90820 CGCGCCCCTAGGTATTCTCTACCTACCCAC 90849 >seq11985 Length=201 Score = 73.4 bits (80), Expect = 1e-10 Identities = 119/168 (71%), Gaps = 4/168 (2%) Strand=Plus/Plus Query 115 GCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC 174 |||||||||||||| | || | || ||||||| || | |||| ||| ||| | || Sbjct 1 GCTACCTTAGGACCCTCATCGGTAAGGCCGCCATTGATTGGGGGTTCCTTCACAACCTAA 60 Query 175 G--CGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATAC 232 | | |||||| || |||||| || || ||||||| |||||||| | |||| Sbjct 61 CTTCATCAGCTAAGAAACTCCGTTAACCAGCCAACATCGGGCAGACGTCACACTCAATAC 120 Query 233 GTCCACTTTCG-TGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | || | | || ||||||||||| |||||| | |||||||||| Sbjct 121 TTAGATTTATGATCTTATGCAGAGTGCTTTGTTTTAATTAAACAGTCG 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260405356992