Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq7998 338 1e-90 seq8453 318 1e-84 seq6950 266 7e-69 seq1816 168 1e-39 seq31300 132 1e-28 seq8026 123 5e-26 seq1702 109 1e-21 seq10231 95.1 3e-17 seq3041 86.0 1e-14 seq7873 73.4 8e-11 >seq7998 Length=612300 Score = 338 bits (374), Expect = 1e-90 Identities = 289/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 23849 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 23790 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23789 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 23730 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 23729 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 23670 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 23669 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 23610 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299 || || ||||||||||||||||||||||||| |||||| || ||||| ||| | Sbjct 23609 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 23550 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 23549 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 23498 >seq8453 Length=8773 Score = 318 bits (352), Expect = 1e-84 Identities = 271/331 (82%), Gaps = 6/331 (2%) Strand=Plus/Plus Query 28 TTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGA 87 |||||||||| || | |||||||||||||| ||||||||||||||||||||||||||| Sbjct 2727 TTTCACCGAGCCTCTCTCTGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGA 2786 Query 88 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACT 147 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 2787 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTAAGGCCGCCGTTCACC 2846 Query 148 GGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAGATCCCCTTAACCTTCCAGCAC 203 ||||||| || | ||| | | | || | || | |||| |||||||||||| Sbjct 2847 GGGGCTTCGGTCGCCGGCTCCCCTGTCATCAAGTCACCAACTTCCTTGACCTTCCAGCAC 2906 Query 204 CGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGT 263 |||||||||||||| || |||||| ||||| |||||| || || || |||||||||||| Sbjct 2907 TGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCTGAGACTTGTGTTTTTGGT 2966 Query 264 AAACAGTCGCTTGGGCCTATTCTCTGCG--GCCTGTCATAGACAGGCACCCCTTCTCCCT 321 ||||| || | |||||| || ||||| || | || |||||||||||||||| Sbjct 2967 AAACAATCACCCGGGCCTGGTCACTGCGACCCCCTTTGTAAGGAGGCACCCCTTCTCCCG 3026 Query 322 AAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||||||||||| |||||||||||||||||| Sbjct 3027 AAGTTACGGGGCTATTTTGCCGAGTTCCTTA 3057 >seq6950 Length=1016052 Score = 266 bits (294), Expect = 7e-69 Identities = 234/288 (81%), Gaps = 8/288 (3%) Strand=Plus/Plus Query 72 TTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTT 131 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 620442 TTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAGCGTTATAGTT 620501 Query 132 ACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC-TC---TAACAGATCCC 187 |||||||||||| || || |||| ||| | ||| | | | || | || | | Sbjct 620502 ACGGCCGCCGTTCACCGGTGCTTCAGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTC 620561 Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||| | || Sbjct 620562 CTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTATGACTTTACGGA 620621 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGAC 304 ||||||||||||||||||||||||| |||||| || ||||| ||| | || Sbjct 620622 GACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAG-G 620680 Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 620681 AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 620728 >seq1816 Length=529132 Score = 168 bits (186), Expect = 1e-39 Identities = 140/169 (83%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| | | Sbjct 368658 CCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGTGG 368599 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGA 303 | ||||||||||||||||||||||||| |||||| || ||||| ||| | || Sbjct 368598 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAG- 368540 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 368539 GAGGCACCCCTTCTCCCAAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 368491 >seq31300 Length=1457403 Score = 132 bits (146), Expect = 1e-28 Identities = 132/171 (77%), Gaps = 10/171 (6%) Strand=Plus/Plus Query 106 TTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGC 165 |||||||||||||||| |||| |||||| |||||||||||| ||||||| |||| || Sbjct 880795 TTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGC 880854 Query 166 TTCGATTGCTCTAACAGATCCCCTTA--ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTA 223 || || ||| || |||| ||||||||||||||| || | ||||| ||| Sbjct 880855 TTAGA--------ACACTTCTCCTTCTGACCTTCCAGCACCGGACAAGTGTCAGACTCTA 880906 Query 224 TACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 |||||||| || | |||||||||| | ||||||||| |||| ||||||| Sbjct 880907 TACATCGTGTTACCACTTAGCAGAGTCTTGTGTTTTTAATAAATAGTCGCT 880957 >seq8026 Length=978627 Score = 123 bits (136), Expect = 5e-26 Identities = 110/136 (81%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 220 CCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGC 279 || |||||| ||||| |||||| || || ||||||||||||||||||||||||| |||| Sbjct 90672 CCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGC 90731 Query 280 CTATTCTCTGCG---GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCAT 336 || || || || ||| | || ||||||||||||||| ||||||||||| || Sbjct 90732 CTGGTCACTACGACCCCCTTTGTGAG-GAGGCACCCCTTCTCCTGAAGTTACGGGGCTAT 90790 Query 337 TTTGCCGAGTTCCTTA 352 |||||||||||||||| Sbjct 90791 TTTGCCGAGTTCCTTA 90806 >seq1702 Length=719121 Score = 109 bits (120), Expect = 1e-21 Identities = 103/130 (79%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 25 CAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTC 84 ||||||||||||| || | | |||||||||| | |||||||||||||| | ||||| Sbjct 376613 CAATTTCACCGAGCCTCTCTCTAAGACAGTGCCTAGATCGTTACGCCTTTTAAGTGGGTC 376554 Query 85 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTT 144 ||| |||| ||| |||||||||| ||||||||| | | ||||||||| |||| || || Sbjct 376553 AGAA-TTACTCGATAAGGAATTTCACTACCTTAGAATCATTATAGTTATGGCCACCATTC 376495 Query 145 ACTGGGGCTT 154 || ||| || Sbjct 376494 ACCAGGGATT 376485 >seq10231 Length=688147 Score = 95.1 bits (104), Expect = 3e-17 Identities = 144/202 (71%), Gaps = 5/202 (2%) Strand=Plus/Minus Query 45 TTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAA 104 ||||||||||||||| ||||| | |||||| | |||||||| |||| ||| ||||| Sbjct 37178 TTGAGACAGTGCCCAGATCGTCATGCCTTTTGCGCGGGTCGAAACTAGTTTGACGAGGAA 37119 Query 105 TTTCGCTACCTTAGG-ACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTT-CAC 162 ||||||||||| ||| ||| | |||| | ||||||||| ||| ||| || ||| | Sbjct 37118 TTTCGCTACCTAAGGAACCATCATAGCTGAAGCCGCCGTTCACTAGGGTTTTGGTTGCGG 37059 Query 163 TGCTTCGATTGCTC---TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCT 219 | ||| | || | || | |||| |||||| | ||| ||||| | |||| | Sbjct 37058 GGTCTCGTATCATCAAGTCACCAACTTCCTTGACCTTCTAACACTGGGCAAGTGTCAAAT 36999 Query 220 CCTATACATCGTCTTGCGACTT 241 || ||||| |||| ||| || Sbjct 36998 CCCATACACGATCTTACGATTT 36977 >seq3041 Length=629252 Score = 86.0 bits (94), Expect = 1e-14 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||||||| ||||| ||||||| ||| |||||| ||||| |||||| || | Sbjct 83362 CCTTGACCTTCCAGCATTGGGCAAGCGTCAGTTCCCATACATGGTCTTACGACTTTGCGG 83421 Query 247 AAACCTGTGTTTTTGGTAAACA 268 | |||| | ||||||||||||| Sbjct 83422 AGACCTAT-TTTTTGGTAAACA 83442 >seq7873 Length=870289 Score = 73.4 bits (80), Expect = 8e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 80340 AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 80293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062067458176