Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9208 297 3e-78 seq7644 282 7e-74 seq15254 192 9e-47 >seq9208 Length=86431 Score = 297 bits (328), Expect = 3e-78 Identities = 224/261 (86%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45079 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 45020 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 45019 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 44962 Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || | | |||| |||||||| | ||||||||||||||| ||||| Sbjct 44961 CCGCGGAGGGTATCCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 44902 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 44901 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 44842 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 44841 AGAAAGAGCTCTCAGTCTGTC 44821 >seq7644 Length=985120 Score = 282 bits (312), Expect = 7e-74 Identities = 221/261 (85%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 799180 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCGTAGAGCATCTAAGGGCATCACAGA 799121 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| || Sbjct 799120 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTAG 799063 Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || | | | |||| ||| |||| | ||||||||||||||| ||||| Sbjct 799062 CCGCGGAGGGTATCCTCCGCGTAGCTAGTTAACAGGCTGAGGTCTCGTTCGTTAACGGAA 799003 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 799002 TTAACCAGACAAATCGCTCCACCAACTAAGAACGACCATGCACCACCACCCATAGAATCA 798943 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 798942 AGAAAGAGCTCTCAGTCTGTC 798922 >seq15254 Length=220 Score = 192 bits (212), Expect = 9e-47 Identities = 174/214 (81%), Gaps = 9/214 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| || Sbjct 212 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 154 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACCAACC-AT 130 ||| | || |||||| | |||| | ||||||||||||| | | | || ||| | Sbjct 153 CAATC-TCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 95 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 94 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 35 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACC 221 ||||| |||||||||||||||||||||||||||| Sbjct 34 AAATCGCTCCACCAACTAAGAACGGCCATGCACC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796558387581