Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2837 390 2e-106 seq5170 374 1e-101 seq7644 327 2e-87 seq18374 192 1e-46 seq7998 105 1e-20 >seq2837 Length=237069 Score = 390 bits (432), Expect = 2e-106 Identities = 263/293 (90%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 158377 TACTAAGTTGAATTACTATTGTGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 158319 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| || Sbjct 158318 CGACGGTCTAAACCTAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 158259 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 158258 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCAAAGGATCAAAAAGCAACGTCGCTAT 158199 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| || |||||||| ||||||||||| ||||||||||||| || ||||||| | Sbjct 158198 GAACGCTTGACTTCCACAAGCAAGTTATCCCTGCGGTAACTTTTCTGACAGCTCTAGCTT 158139 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| || || |||||||||||||||||||| |||||||||||||||||| Sbjct 158138 CAAATTCTGAAGGTCTAAAGGATCGATAGGCCACGCTTTCATGGTTTGTATTC 158086 >seq5170 Length=1600330 Score = 374 bits (414), Expect = 1e-101 Identities = 260/294 (88%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||| Sbjct 1138799 TACTAGGTTGAATTACTATTGCGAC-ACTATCATCAGTAGGGTAAAACTAACCTGTCTCA 1138741 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 || |||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 1138740 CGATGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 1138681 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1138680 ATTCTGCTTCACAATGATAGGAAGAGCCAACATCGAAGGATCAAAAAGCAACGTCGCTAT 1138621 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||||||||||||||| || || ||||||| | Sbjct 1138620 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTTTGACATCTCTAGCTT 1138561 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||| | || ||||||||||||||||| || |||||| |||| ||||||| Sbjct 1138560 TAAATTCTAAAGGTCTAAAGGATCGATAGGCTACGCTTTCACGGTTCGTATTCA 1138507 >seq7644 Length=985120 Score = 327 bits (362), Expect = 2e-87 Identities = 221/246 (90%), Gaps = 1/246 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | | ||||| |||| | | || |||| ||||||||||||||||||||||||| Sbjct 777464 TACTAGGTTGGATTACTATTGTGAC-ACTATCATTAGTAGGGTAAAACTAACCTGTCTCA 777406 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 777405 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 777346 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 777345 ATTCTGCTTCACAATGATAGGAAGAGTCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 777286 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| | Sbjct 777285 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTAGTAACTTTTTTGACACCTCTAGCTT 777226 Query 241 CAAATT 246 |||||| Sbjct 777225 CAAATT 777220 >seq18374 Length=247 Score = 192 bits (212), Expect = 1e-46 Identities = 106/106 (100%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 60 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 106 >seq7998 Length=612300 Score = 105 bits (116), Expect = 1e-20 Identities = 104/134 (78%), Gaps = 3/134 (2%) Strand=Plus/Plus Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC---AAGCCAGTTA 207 |||||| ||||||||| ||||| || || ||||| || | || || |||| ||||| Sbjct 450580 CATCGAGGGATCAAAAGGCAACATCTCTTTGAACATTTCGTTGTCATTATAAGCTAGTTA 450639 Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGAT 267 || || || ||| |||| | |||||| | | | ||||||| | | ||||||||||||| Sbjct 450640 TCTCTATGATAATTTTTGTAACACCTCAAACTTTAAATTTCAAAGATCTAAAGGATCGAT 450699 Query 268 AGGCCACACTTTCA 281 |||||||||||||| Sbjct 450700 AGGCCACACTTTCA 450713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854132564256