Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq8453 206 5e-51 seq1175 187 5e-45 seq5170 163 6e-38 seq6947 136 8e-30 seq3137 132 1e-28 seq3906 114 3e-23 seq6748 73.4 8e-11 >seq8453 Length=8773 Score = 206 bits (228), Expect = 5e-51 Identities = 229/303 (76%), Gaps = 18/303 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 8393 GGCATTGCTCCGTCAGGCTTTCACCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 8452 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 8453 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 8512 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 8513 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCTTCCTCGG 8572 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 8573 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 8616 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || | | ||||||||||||||| Sbjct 8617 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTATGCGTTACTCACCCGTCCA 8675 Query 300 CCA 302 ||| Sbjct 8676 CCA 8678 >seq1175 Length=20146 Score = 187 bits (206), Expect = 5e-45 Identities = 226/306 (74%), Gaps = 20/306 (7%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| |||||| | || || ||||||| ||||||||||||| Sbjct 2383 GGCATTGCTCCGTCAGGCTTTCGTCCATTGCGGAAAATTCCCCACTACTGCCTCCCGTAG 2442 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 2443 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 2502 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | || |||||| |||||| ||||||||||| |||||| | ||||||| || | Sbjct 2503 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGATTCGAGCCCCTCCTCGG 2562 Query 181 GC-GATAAAT-CTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGT 238 || ||| | |||| || ||||| | | || | ||||||||| Sbjct 2563 GCGGATTCCTCCTTTTGT---------------TCCTCAGCC--TACGGGGTATTAGCAG 2605 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||||| ||| |||| ||| || |||||||| || || ||||||||||| ||| Sbjct 2606 CCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACACGTTACTCACCCATCC 2664 Query 299 GCCACT 304 |||||| Sbjct 2665 GCCACT 2670 >seq5170 Length=1600330 Score = 163 bits (180), Expect = 6e-38 Identities = 132/160 (83%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||| || |||||||||| Sbjct 1499462 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTACTACCTCCCGTAG 1499521 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 1499522 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 1499581 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 | || |||||| |||||| ||||||||||| |||||| Sbjct 1499582 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAATC 1499621 >seq6947 Length=157366 Score = 136 bits (150), Expect = 8e-30 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 21994 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 22053 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 22054 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 22113 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 22114 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 22146 >seq3137 Length=1031529 Score = 132 bits (146), Expect = 1e-28 Identities = 99/116 (85%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 56 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTA 115 ||||||||||||||| |||||||||||||| |||||| | ||| |||||||| || |||| Sbjct 640751 CGTAGGAGTCTGGGCTGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTA 640692 Query 116 CCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCC 171 | |||| ||| |||||| |||||| ||||||||||| |||||| | |||||||| Sbjct 640691 CTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCC 640636 >seq3906 Length=99322 Score = 114 bits (126), Expect = 3e-23 Identities = 100/123 (81%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 53 TCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGG 112 ||||||||||||||||||||||||||||| | | ||||| | ||| |||||| | || Sbjct 85197 TCCCGTAGGAGTCTGGGCCGTGTCTCAGTTC-AGTGTGGTTGATCATCCTCTCGGACCAA 85255 Query 113 CTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCC 172 |||| |||| ||| |||||| |||||| ||||||||||| |||||| | | ||||||| Sbjct 85256 CTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACACGAGCCC 85315 Query 173 ATC 175 || Sbjct 85316 CTC 85318 >seq6748 Length=474161 Score = 73.4 bits (80), Expect = 8e-11 Identities = 63/77 (82%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 228 GGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTA 287 ||||||||| |||||||| ||| |||| ||| || |||||||| || ||| |||| Sbjct 158464 GGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTA 158406 Query 288 CTCACCCGTCCGCCACT 304 ||||||||||||||||| Sbjct 158405 CTCACCCGTCCGCCACT 158389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998087490816