Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq7998 219 1e-54 seq8453 206 6e-51 seq5965 206 6e-51 seq11721 172 1e-40 seq11713 172 1e-40 seq11229 147 5e-33 seq10441 118 2e-24 >seq7998 Length=612300 Score = 219 bits (242), Expect = 1e-54 Identities = 300/408 (74%), Gaps = 17/408 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 23195 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCA 23136 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 23135 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 23076 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACT-GACA 176 ||||||| || ||| || || ||||| || | ||| ||||| || || | | Sbjct 23075 ACATTCTCGCTTCCGCTTCGTCT--ACCACTGC-TCGCGCGGGTGCTTC-CCTCTAGGCG 23020 Query 177 CGACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 ||||||||||||| | || ||| | ||||||||||||| ||| |||| || Sbjct 23019 GAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-GC 22964 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| | ||| ||||||| | | || || |||||||||||||||||||||||||||| Sbjct 22963 CCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGG 22905 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| | || |||||||||| ||||| ||| | | || |||||| |||||| Sbjct 22904 GTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGA 22845 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 22844 GCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 22797 >seq8453 Length=8773 Score = 206 bits (228), Expect = 6e-51 Identities = 297/408 (73%), Gaps = 17/408 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 3360 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCA 3419 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGT-CACACGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | | || |||||| || Sbjct 3420 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGCTTGCGTTACTCAAGCTG 3479 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACT-GACA 176 |||||||||| ||| ||| || ||||| | || | || ||||| || || | | Sbjct 3480 ACATTCTCACTTCCGCTTCATCT--ACCACT-ACTCGCGTGGGTGCTTC-CCTCTAGGCG 3535 Query 177 CGACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 ||||||||||||| | || ||| | ||| ||||||||| ||| |||| || Sbjct 3536 GAACGCTCCCCTACCGATGCATTTTTACA---TCCCATAGCTTCGGCAGATCGCTTA-GC 3591 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| | ||| | ||||| | || || |||||||||||||||||||||||||||| Sbjct 3592 CCCGTT-CATCTTTGGCGCAAGAGTGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGG 3650 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| | || |||||||||| ||||| ||| | | || |||||| |||||| Sbjct 3651 GTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGA 3710 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | | |||||||||||||||| ||||| ||||| ||||||||||| Sbjct 3711 GCGGTTATTTAGGGGCCTTAGCTGGTGATCCGGGCTATTTCCCTCTCG 3758 >seq5965 Length=670674 Score = 206 bits (228), Expect = 6e-51 Identities = 297/407 (73%), Gaps = 20/407 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 414745 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCA 414804 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 414805 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 414864 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACT-GACA 176 ||||||| || ||| || || ||||| || | ||| ||||| || || | | Sbjct 414865 ACATTCTCGCTTCCGCTTCGTCT--ACCACTGC-TCGCGCGGGTGCTTC-CCTCTAGGCG 414920 Query 177 CGACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 ||||||||||||| | || ||| | ||||||||||||| ||| |||| || Sbjct 414921 GAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-GC 414976 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| | ||| ||||||| | | || || |||||||||||||||||||||||||||| Sbjct 414977 CCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGG 415035 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| | || |||||||||| ||||| ||| | | || || ||| ||||| Sbjct 415036 GTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCTTTT---ACTGA 415092 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399 | || |||||||||||||||| ||||| |||||||||||||||| Sbjct 415093 GCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTC 415139 >seq11721 Length=670254 Score = 172 bits (190), Expect = 1e-40 Identities = 176/226 (78%), Gaps = 9/226 (4%) Strand=Plus/Minus Query 179 ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCC 234 ||||||||||||| | || ||| | ||||||||||||| ||| |||| |||| Sbjct 234853 ACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-GCCC 234798 Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294 || | ||| ||||||| | | || || |||||||||||||||||||||||||||| | Sbjct 234797 CGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGT 234739 Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354 ||||||||| | || |||||| |||||| ||| | || |||||| ||||||| Sbjct 234738 GGCTGCTTCTAGAAAAATCTCCTGATTGTCTCTGCACCCGTACCTCCTTTATCACTGAGC 234679 Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || |||||||||||||||| ||||||||||||||||||||||| Sbjct 234678 AGTCATTTAGGGGCCTTAGCTGGTGATCTGGGCTGTTTCCCTCTCG 234633 >seq11713 Length=479717 Score = 172 bits (190), Expect = 1e-40 Identities = 156/194 (80%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 |||||||||||| ||| ||||| |||||| | ||| ||||||| | || || || Sbjct 39855 CCACAGCTTCGGTAGATCACTTA-GCCCCGTT-CATCTTCGGCGCAAGAGTGCTCGATCA 39912 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||||||||||| ||||||||| | || |||||||||||||||| Sbjct 39913 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTGTAGGCAAACCTCCTGGTTGTCTC 39972 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || |||||| || |||| || |||||||||||||||| ||||| || Sbjct 39973 TGCACCCCTACCTCCTTTATCATTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCAGG 40032 Query 387 CTGTTTCCCTCTCG 400 |||||||||||||| Sbjct 40033 CTGTTTCCCTCTCG 40046 >seq11229 Length=269390 Score = 147 bits (162), Expect = 5e-33 Identities = 140/175 (80%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 205 TGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGAC 264 |||| |||||||||| ||| |||| |||||| | ||| ||||||| | | || || Sbjct 116982 TGCC-CAGCTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGAT 117038 Query 265 CAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTC 324 |||||||||||||||||||||||||||| |||||||||| | || |||||||||| |||| Sbjct 117039 CAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTC 117098 Query 325 TACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATG 379 | ||| | | || |||||| ||||||| || |||||||||||||||| || Sbjct 117099 TCTGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTG 117153 >seq10441 Length=360675 Score = 118 bits (130), Expect = 2e-24 Identities = 135/179 (75%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||| ||| ||| |||| |||| | | ||| ||| ||| | || || || Sbjct 274539 CCACAGCTTTGGCAGATCGCTTA-GCCCTGTT-CATCTTCGACGCAAGAGTGCTCGATCA 274482 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 || |||||||| |||||||||||||| |||||||||| | || |||||| ||| ||||| Sbjct 274481 GTAAGCTATTATGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCATGGCTGTCTC 274422 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGG 385 ||| | | || |||||| ||||||| || ||| |||||| ||||| ||||| || Sbjct 274421 TGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAAGGGCCTAAGCTGGTGATCCGG 274363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177231399424