Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq6150 131 1e-28 seq8305 118 9e-25 seq6947 118 9e-25 seq10441 114 1e-23 seq8329 113 4e-23 seq1175 102 7e-20 seq31300 98.7 8e-19 seq8453 96.9 3e-18 >seq6150 Length=364966 Score = 131 bits (144), Expect = 1e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 162268 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 162327 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| ||||||||| ||||||| |||| |||||||| ||| Sbjct 162328 GATCGCGACCCTTTGTCCCGACCATTGTAGCACGTGTGTCGCCCAGAGCATAAGGGGCAT 162387 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 162388 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 162427 >seq8305 Length=84644 Score = 118 bits (130), Expect = 9e-25 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||| ||| |||||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 8609 CGAGTTCCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 8550 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| | | |||||||| ||||||| |||| |||||||| ||| Sbjct 8549 GATCGCGACCCTTTATCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGACAT 8490 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 8489 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 8450 >seq6947 Length=157366 Score = 118 bits (130), Expect = 9e-25 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| |||| ||| | | Sbjct 19533 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCTGCCTTACAG 19475 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| |||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 19474 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 19415 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 19414 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 19375 >seq10441 Length=360675 Score = 114 bits (126), Expect = 1e-23 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 3 GAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGG 62 ||||||||| |||||||||| ||| | ||| ||| ||||||| |||||||||| Sbjct 277851 GAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGGG 277910 Query 63 TTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATG 122 | | | |||| ||| |||||||| ||||||| |||| |||||||| |||| Sbjct 277911 ATCGTGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATG 277970 Query 123 AGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160 | ||||||||||||||| ||||||||||| | || ||| Sbjct 277971 ATGACTTGACGTCATCCTCACCTTCCTCCTGCTTATCA 278008 >seq8329 Length=349134 Score = 113 bits (124), Expect = 4e-23 Identities = 121/159 (76%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 3 GAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGG 62 |||||||||| |||||||| ||| | | ||||| || ||| |||| ||| | | Sbjct 94875 GAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCTGCCTTACAGC 94817 Query 63 TTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATG 122 | || ||| |||| | |||||||| ||||||| |||| ||||||||||||||| Sbjct 94816 CTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATG 94757 Query 123 AGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||||||||||||||||||| || | |||| Sbjct 94756 CGGACTTGACGTCATCCCCACCTTCCTCGAGTATATCAC 94718 >seq1175 Length=20146 Score = 102 bits (112), Expect = 7e-20 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 36 TTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACG 95 ||| ||| ||||||| |||||||||| | ||| |||| ||| |||||||| ||| Sbjct 1518 TTTTTGGAGTTAGCTCACCCTCGCGGGATCGCGACCCTTTGTCCCGGCCATTGTAGCACG 1577 Query 96 TGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTT 155 |||| ||| |||||||| ||||| |||||||||| |||| ||||||||||||| | Sbjct 1578 TGTGTCACCCAGGGCATAAGGGGCATGATGACTTGACGTTATCCTCACCTTCCTCCGGCT 1637 Query 156 TGTCAC 161 | |||| Sbjct 1638 TATCAC 1643 >seq31300 Length=1457403 Score = 98.7 bits (108), Expect = 8e-19 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 75 TGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGT 134 |||| | |||||||| ||||||| |||| ||||||||||||||| ||||||||||| Sbjct 328972 TGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGT 329031 Query 135 CATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||||||||| || | |||| Sbjct 329032 CATCCCCACCTTCCTCCAGTATATCAC 329058 >seq8453 Length=8773 Score = 96.9 bits (106), Expect = 3e-18 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 3 GAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGG 62 ||||||||| |||||||||| | | | ||| | | ||||||| ||||| | || Sbjct 7495 GAGTTGCAGCCTACAATCCGAAATGAGGACGGGTTTTTAGAGTTAGCTCACCCTCTCAGG 7554 Query 63 TTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATG 122 | ||| |||| ||| |||||||| ||||||| ||| |||||||| ||| Sbjct 7555 ATTGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCACCCAGGGCATAAGGGGCATA 7614 Query 123 AGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160 | ||||||||||||||| ||||||||||||| || ||| Sbjct 7615 ATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCA 7652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415873856970