Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq1175 149 1e-33 seq6947 141 2e-31 seq10441 129 1e-27 seq8453 127 3e-27 seq5170 125 1e-26 seq8992 93.3 7e-17 >seq1175 Length=20146 Score = 149 bits (164), Expect = 1e-33 Identities = 204/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || ||| || |||||||| | Sbjct 2037 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCACCGTTGGTGTTCTTT 2096 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 || ||||||||||||| |||| ||| | |||||| |||| || | | |||| || Sbjct 2097 TCGATCTCTACGCATTTCATCGCTCCACCGGAAATTCCCTCTGCCCCTACTGTACTCCAG 2156 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | ||||| Sbjct 2157 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 2216 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| |||||| Sbjct 2217 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 2276 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 2277 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 2321 >seq6947 Length=157366 Score = 141 bits (156), Expect = 2e-31 Identities = 204/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| | ||||||| || |||| | | |||||||| ||| || Sbjct 21637 CCCATGCTTTCGCACTCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGT 21696 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| |||| |||| || |||||||| ||||||||| |||||| | ||||| ||| Sbjct 21697 TCCTTCGTAGATCTCCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 21756 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGA-GCCCATAGTTTTCACATCTGAC 179 ||||| || ||||| | ||| | | ||| | | | |||||| | || Sbjct 21757 TCAAGTGAATTGGTTTCGAGAGCATTCCACCAGTTTTTGGCGAC---TTTCACTTTCAAC 21813 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 | | |||||||| ||||||||| |||| | | |||| | ||| |||||| || | Sbjct 21814 CCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCC 21873 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 || |||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 21874 GTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 21919 >seq10441 Length=360675 Score = 129 bits (142), Expect = 1e-27 Identities = 202/288 (70%), Gaps = 6/288 (2%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | |||||| || |||| | |||||||| | Sbjct 278403 GCTTTCGTCTCTCAGTGTCAGTGTTGGCCCAGCAGAGTGCTTTCGTCGTTGGTGTTCTTT 278462 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || ||||| |||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 278463 CCGATCTCTACTCATTTCACCGCTCCACCAGAAATTCCCTCTGCCCCTACCGTACTCCAG 278522 Query 126 AAAAACAGTTTCAAATGCAGGCTAT---GGGTTGAGCCCATAGTTTTCACATCTGACTTG 182 |||||| | || |||| || |||||||| | ||| | | ||||| Sbjct 278523 CTTGGTAGTTTCCACCGC---CTATCCAGGTTTGAGCCCTGGGATTTGATGGCAGACTTA 278579 Query 183 CCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTA 242 || |||||| |||||| |||||| | || ||||||||||||| ||| ||| Sbjct 278580 AAAAGCCACCTACAGATGCTTTACGCCCAATTATTCTGGATAACGCTTGCATCCTCTGTA 278639 Query 243 TTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||| ||||||||| ||||||||| ||||||||| ||| || Sbjct 278640 TTACCGCGGTTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 278687 >seq8453 Length=8773 Score = 127 bits (140), Expect = 3e-27 Identities = 193/275 (70%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75 ||||| |||||| | | |||||| || || || |||||||| | | || |||| Sbjct 8057 CTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTTTCCGTTGGTGTTCTTTCCGATCTCTA 8116 Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135 |||||||||||||| ||| | |||||| |||| || | |||| || |||| Sbjct 8117 CGCATTTCACCGCTCCACTGGAAATTCCCTATGCCCCTACCATACTCCAGCTTGGTAGTT 8176 Query 136 TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTAC 195 || | || | |||||||||| | ||| || | ||||| || ||||| Sbjct 8177 TCCACCGCCTGTCCAGGGTTGAGCCTTGGGATTTGACGGCAGACTTAAAAAGCCACCTAC 8236 Query 196 ACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGC 255 | | |||||| |||||| | ||| |||||||||||| ||| ||||||| || ||||| Sbjct 8237 AGACGCTTTACGCCCAATCATTCCAGATAACGCTTGCATCCTCTGTATTACTGCAGCTGC 8296 Query 256 TGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||| ||||||||| ||||||||| ||| || Sbjct 8297 TGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 8331 >seq5170 Length=1600330 Score = 125 bits (138), Expect = 1e-26 Identities = 170/236 (72%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 58 TGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAG 117 ||||| | | || |||||||||||||||||| ||| | |||||| |||| || | | Sbjct 1499168 TGTTCTTTCTGATCTCTACGCATTTCACCGCTCCACCAGAAATTCCCTCTGCCCCTACCG 1499227 Query 118 CACTCAAGAAAAACAGTTTCAAATGCAGGCTAT---GGGTTGAGCCCATAGTTTTCACAT 174 |||| || |||||| | || |||| ||||||||||| | ||| || Sbjct 1499228 TACTCCAGCTTGGTAGTTTCCACCGC---CTATCCAGGGTTGAGCCCTGGGATTTGACGG 1499284 Query 175 CTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCA 234 | ||||| || |||||| |||||| |||||| | |||||||||||||| | Sbjct 1499285 CGGACTTAAAAAGCCACCTACAGATGCTTTACGCCCAATCATTCCGGATAACGCTTACAT 1499344 Query 235 CCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| || ||||||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 1499345 CCTCTGTTTTACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 1499400 >seq8992 Length=393971 Score = 93.3 bits (102), Expect = 7e-17 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 202 TTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCAC 261 ||||| |||||| | ||| |||||||| ||| ||| |||||||||||||||||||||| Sbjct 148246 TTTACGCCCAATCATTCCAGATAACGCATGCATCCTCTGTATTACCGCGGCTGCTGGCAC 148305 Query 262 GTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||| ||||||||| ||| || Sbjct 148306 AGAGTTAGCCGATGCTTATTCCCCAGATA 148334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828548684271