Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq7998 268 1e-69 seq8453 246 5e-63 seq11717 228 1e-57 seq4733 199 6e-49 seq4711 150 3e-34 seq5897 122 1e-25 seq7955 114 2e-23 seq4874 100 4e-19 >seq7998 Length=612300 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 24589 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 24530 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 24529 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 24470 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 24469 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 24410 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 24409 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 24350 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 24349 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 24317 >seq8453 Length=8773 Score = 246 bits (272), Expect = 5e-63 Identities = 219/273 (80%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||| | |||||| |||| |||| ||| |||||| Sbjct 1966 GGTGGGCTTACTTCTTAGATGCTTTCAACAGTTATCCGCTCCACACTTGGCTACCCAGCG 2025 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||| ||||||||||||| Sbjct 2026 TTTACCGTGGGCATGATAACTGGTACACCAGAGGTGCGTCCTTCCCAGTCCTCTCGTACT 2085 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| |||||||||||||| || Sbjct 2086 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATAGACCGAACTGTCTCACG 2145 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| | ||||||||| |||||| |||||||||||| || | Sbjct 2146 ACGTTCTGAACCCAGCTCACGTACTGCTTTAATGGACGAACAACCCAACCCTTGGAACAT 2205 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 2206 ACTACAGCCCCAGGTAGCGAAGAGCCGACATCG 2238 >seq11717 Length=317154 Score = 228 bits (252), Expect = 1e-57 Identities = 207/258 (80%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 74599 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 74540 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | ||||||| |||||||| | |||| ||||||||||||||||||| | | || |||| Sbjct 74539 CGATAACTGGTACACCAGAGATGCGTCCTTCCCGGTCCTCTCGTACTAGGAAAAGGTCCT 74480 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||| ||||| | Sbjct 74479 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTTTGAACTC 74420 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| | ||||||||||||||||||||||||||||| || |||| |||||||| Sbjct 74419 AGCTCACGTACTGCTTTAATGGGCGAACAGCCCAACCCTTGGAACGTACTACAGCCCCA- 74361 Query 256 GATGAGACGAGCCGACAT 273 | | || ||||||| || Sbjct 74360 GTGGCGAAGAGCCGATAT 74343 >seq4733 Length=1114157 Score = 199 bits (220), Expect = 6e-49 Identities = 183/230 (80%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||| | |||||| |||||| ||| |||| ||| ||||| Sbjct 838258 GGTGGGCTTACTACTTAGATACTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGTG 838317 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 838318 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 838377 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 838378 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 838437 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACC 232 |||||||||||||| ||| || || |||||||||||||||| ||||||| Sbjct 838438 ACGTTCTGAACCCAACTCATGTACCGCTTTAATGGGCGAACATCCCAACC 838487 >seq4711 Length=586766 Score = 150 bits (166), Expect = 3e-34 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 81 ACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAA 140 |||||| || ||||||| ||||| ||||| ||||||||||||| ||| || | |||| || Sbjct 524155 ACTGGTACAACAGAGGTGTGTCCTTCCCGCTCCTCTCGTACTAGGGAAAGGTTCTCTTAA 524214 Query 141 ATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTC 200 || | |||||| ||||| |||| |||||||||| |||||||||||| ||||||| Sbjct 524215 TGATCTAATGCCCACATTGGATATGGACGGAACTGTCTCACGACGTTCTGAATCCAGCTC 524274 Query 201 GCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGA 260 ||| ||||||| || |||| || ||||||||| || |||| | |||||| | | Sbjct 524275 ACGTATGGCTTTAATACGCAAACAACCTAACCCTTGGAACATACTACCGCCCCAAGTGGC 524334 Query 261 GACGAGCCGACAT 273 || ||| | |||| Sbjct 524335 GAAGAGTCAACAT 524347 >seq5897 Length=335824 Score = 122 bits (134), Expect = 1e-25 Identities = 102/125 (82%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188 || ||||||||| || |||| ||| | |||| |||||||||| |||| ||| |||| Sbjct 51027 AGGTCCTCTCAATGCTCTAACGCGCACACCAGATATGGACCGAACTATCTCACGATGTTC 51086 Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248 |||||||| ||| | | || ||||||||||||||||||||||||||||| || |||| || Sbjct 51087 TGAACCCAACTCACATACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACA 51146 Query 249 GCCCC 253 | ||| Sbjct 51147 GGCCC 51151 >seq7955 Length=1171127 Score = 114 bits (126), Expect = 2e-23 Identities = 137/183 (75%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | ||||||| ||||||| || ||| ||||| |||||||||| || | | || Sbjct 1153056 GGCACGATAACTGGTACACCAGAAATTCGTCTTTCCCGATCCTCTCGTATTAGGAAAAGA 1153115 Query 132 TCCTCTCAAATTTCCTACGCCC--ACGACGGATAGGGACCGAACTGTCTCGCGACGTTCT 189 ||||||||| || | |||| || | |||| |||| ||||||||| |||||| Sbjct 1153116 TCCTCTCAATACTCTAAAGCCCGAACTA--GATATGGACTGAACTGTCTAATGACGTTTG 1153173 Query 190 GAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAG 249 ||||||| ||| || || ||||||||| |||||||||||| ||||| || || | || Sbjct 1153174 GAACCCAACTCACGCACCATTTTAATGGG-GAACAGCCCAACTCTTGGAACATAATATAG 1153232 Query 250 CCC 252 ||| Sbjct 1153233 CCC 1153235 >seq4874 Length=649385 Score = 100 bits (110), Expect = 4e-19 Identities = 140/196 (71%), Gaps = 9/196 (5%) Strand=Plus/Minus Query 84 GGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATT 143 ||| ||| | || | | ||| ||| |||||||||||||| || ||| ||| || | Sbjct 477298 GGTACACTATAGATAGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTTCTCGCAGTTC 477239 Query 144 TCC----TACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCT 199 ||| || || |||| |||| | | |||||||||| ||||| ||||| || Sbjct 477238 TCCCTTTAACACCAACGATAGATAAGAATCGAACTGTCTTATGACGT-----ACCCAACT 477184 Query 200 CGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATG 259 | ||| || || ||| || ||||| | |||| ||||||||| ||||| | |||||||| Sbjct 477183 CACGTACCAGTTGAATCGGTGAACAACTGAACCATTGGGACCTTCTTCAACTCCAGGATG 477124 Query 260 AGACGAGCCGACATCG 275 || ||| |||||||| Sbjct 477123 TGATGAGTCGACATCG 477108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780563239236