Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq1175 257 4e-66 seq8453 248 2e-63 seq5170 205 2e-50 seq6947 170 5e-40 seq3137 127 5e-27 seq3906 120 7e-25 seq8992 107 5e-21 seq818 95.1 3e-17 >seq1175 Length=20146 Score = 257 bits (284), Expect = 4e-66 Identities = 304/410 (74%), Gaps = 30/410 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| || ||||| Sbjct 2352 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGTCCATT 2411 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||| ||||||||||||||||||||| |||||||||||| ||||||| Sbjct 2412 GCGGAAAATTCCCCACTACTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 2471 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| || ||| ||| || ||| || | ||| Sbjct 2472 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCACCTTGGTAAGCTATTGCCTCACCA 2531 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| || | | | ||| || | || ||| ||| |||| Sbjct 2532 ACTAGCTAATCAGATTCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGT 2580 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| |||||||||| ||| | ||||||| |||| Sbjct 2581 TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCA 2638 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | || |||||||||| ||||||||| ||| || || |||| Sbjct 2639 GGTTCTTACACGTTACTCACCCATCCGCCACT------GGAAACACCA-----CTTC--- 2684 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || |||||||||| |||| ||||| Sbjct 2685 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCATTCATCCTGAG 2731 >seq8453 Length=8773 Score = 248 bits (274), Expect = 2e-63 Identities = 302/410 (74%), Gaps = 30/410 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| | |||||| Sbjct 8362 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCACCCATT 8421 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 8422 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 8481 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 8482 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 8541 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 8542 ACTAGCTAATCAGACGCGAGCCCTTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 8590 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| |||||||||| ||| | ||||||| |||| Sbjct 8591 TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCA 8648 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||| ||| | ||| || || |||| Sbjct 8649 GGTTCTTATGCGTTACTCACCCGTCCACCATT------GGAAACACCA-----CTTC--- 8694 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| ||||||||||||||| || |||| |||||||||| ||||| Sbjct 8695 ---CCGTCTGACTTGCATGTGTTAAGCATGCCACCAGCGTTCATCCTGAG 8741 >seq5170 Length=1600330 Score = 205 bits (226), Expect = 2e-50 Identities = 160/191 (84%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | || ||||||| ||| | |||||||| |||||||| Sbjct 1499431 TTCACGACCCGTAGGCCTTCTACCTCCATGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 1499490 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||| || |||||||||||||||||| |||||||||||| ||||||| Sbjct 1499491 GCGGAAAATTCCCCACTACTACCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 1499550 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| || ||| ||| || ||| || | ||| Sbjct 1499551 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCACCTTGGTAAGCTATTGCCTCACCA 1499610 Query 185 ACTAGCTAATC 195 ||||||||||| Sbjct 1499611 ACTAGCTAATC 1499621 >seq6947 Length=157366 Score = 170 bits (188), Expect = 5e-40 Identities = 154/193 (80%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 21954 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 22013 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| |||| Sbjct 22014 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 22073 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| |||||| |||||||||| | ||| | | || ||| ||| ||||| Sbjct 22074 TGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGA 22133 Query 182 CCAACTAGCTAAT 194 ||||||| ||||| Sbjct 22134 CCAACTACCTAAT 22146 >seq3137 Length=1031529 Score = 127 bits (140), Expect = 5e-27 Identities = 91/105 (87%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 91 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150 ||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||| Sbjct 640751 CGTAGGAGTCTGGGCTGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTA 640692 Query 151 GGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 |||| |||||| ||| || ||| || | |||||||||||||| Sbjct 640691 CTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATC 640647 >seq3906 Length=99322 Score = 120 bits (132), Expect = 7e-25 Identities = 92/108 (85%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 88 TCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAG 147 |||||||||||||||| |||||||||||||| ||||||| || |||||||||| ||||| Sbjct 85197 TCCCGTAGGAGTCTGGGCCGTGTCTCAGTTC-AGTGTGGTTGATCATCCTCTCGGACCAA 85255 Query 148 CTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 ||| |||| |||||| ||| || ||| || | |||||||||||||| Sbjct 85256 CTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATC 85303 >seq8992 Length=393971 Score = 107 bits (118), Expect = 5e-21 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| | |||||| Sbjct 148365 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCACCCATT 148424 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 103 | || ||||||||||||||||||||||||||| |||| Sbjct 148425 GCAGAAAATTCCCCACTGCTGCCTCCCGTAGGAGGCTGG 148463 >seq818 Length=518547 Score = 95.1 bits (104), Expect = 3e-17 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 106 CGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAG 165 ||||||||| | |||||||||||| |||||||||||||||||||| |||| |||||| Sbjct 122800 CGTGTCTCAATCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTCA 122859 Query 166 GTGGGCCATTACCCCGCCAACTAGCTAATC 195 || || ||| || | | |||||||||||| Sbjct 122860 GTAAGCTATTGCCTCACTAACTAGCTAATC 122889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222017376576