Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq8453 315 2e-83 seq1175 311 3e-82 seq5170 293 7e-77 seq6947 269 8e-70 seq8992 172 2e-40 seq10441 140 1e-30 seq3137 134 4e-29 seq3906 123 7e-26 seq818 105 2e-20 >seq8453 Length=8773 Score = 315 bits (348), Expect = 2e-83 Identities = 277/343 (81%), Gaps = 3/343 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 8559 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 8500 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 8499 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 8440 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | ||||||| ||||||||| | ||||| |||||||| | || Sbjct 8439 CAGTGGGGAATTTTCCGCAATGGGTGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 8380 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||||| || ||| | | || ||||| ||| |||||| || ||| Sbjct 8379 AGGCCTACGGGTCGTGAACTTCTTTTCCCAGAGAAGAAGCAATAACGGTATCTGGGGAAT 8320 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||| || ||||||| ||| || ||||||||| | Sbjct 8319 AAGCATCGGCTAACTCTGTGCCAGCAGCTGCAGTAATACAGAGGATGCAAGCGTTATCTG 8260 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || ||||||| Sbjct 8259 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 8218 >seq1175 Length=20146 Score = 311 bits (344), Expect = 3e-82 Identities = 275/340 (81%), Gaps = 5/340 (1%) Strand=Plus/Minus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 |||||||||||||||||| ||| || ||||||||||| || |||||||||| | | || Sbjct 2545 TCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGTGATGATCAGTAGCTGGTCCGA 2486 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 |||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| ||| Sbjct 2485 GAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGTAGT 2426 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 ||||||| || | |||||| | ||||||||| | ||||| |||||||| | |||||| Sbjct 2425 GGGGAATTTTCCGCAATGGACGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGC 2366 Query 344 CTTCGGGTCGTAAAGCTCTGTCCTC---AAGGAAGATAATGACGGTACTTGAGGAGGAAG 400 || |||||||| || ||| | | | || |||| |||||||||| || ||| ||| Sbjct 2365 CTACGGGTCGTGAACTTCTTTTCCCGGAAAAGAAG-CAATGACGGTATCTGGGGAATAAG 2307 Query 401 CCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAA 460 | ||||||||| |||||||||||||||||||||| ||| || |||||||||||||| Sbjct 2306 CATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAA 2247 Query 461 TTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | | | |||||||||| || |||||||| || ||||||| Sbjct 2246 TGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 2208 >seq5170 Length=1600330 Score = 293 bits (324), Expect = 7e-77 Identities = 269/338 (80%), Gaps = 3/338 (1%) Strand=Plus/Minus Query 165 CTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAG 224 ||||||||||||||||| ||| || ||||||||||| || |||||||||| | | ||| Sbjct 1499623 CTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGTGATGATCAGTAGCTGGTCCGAG 1499564 Query 225 AGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTG 284 ||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||| || |||| Sbjct 1499563 AGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGTAGTAGTG 1499504 Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344 |||||| || | |||||||| ||||||||| | ||||| ||||| || | ||||||| Sbjct 1499503 GGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCATGGAGGTAGAAGGCC 1499444 Query 345 TTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGAAGCC 402 | |||||||| || ||| | | | ||||| |||||||||| || ||| |||| Sbjct 1499443 TACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAATAAGCA 1499384 Query 403 CCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATT 462 ||||||||| ||||||||||||||||||| || ||| | ||||||||||||||| Sbjct 1499383 TCGGCTAACTCTGTGCCAGCAGCCGCGGTAAAACAGAGGATGTAAGCGTTATCCGGAATG 1499324 Query 463 ACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | | |||||||||| | |||||||| || ||||||| Sbjct 1499323 A-TTGGGCGTAAAGCATCTGTAGGTGGCTTTTTAAGTC 1499287 >seq6947 Length=157366 Score = 269 bits (298), Expect = 8e-70 Identities = 258/327 (79%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| |||||||| |||||| |||| |||||| | | ||| |||| | || || Sbjct 22146 ATTAGGTAGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATGCTTAGCTGGTCTTTTCGG 22087 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| |||||| ||| |||||||||||| || ||||| ||||| ||||||||||||| Sbjct 22086 ATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGG 22027 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC--T 345 ||| ||| ||||||||| |||||| ||| |||||| |||||||| || ||||| | | Sbjct 22026 AATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAAT 21967 Query 346 TCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAGGAGGAAGCCC 403 | | | |||||||||| || || | | ||| ||||| | ||| ||||| ||||||| Sbjct 21966 GCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCC 21907 Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463 ||||||||| |||||||||||||||||||| ||| |||||| || ||| | |||||| | Sbjct 21906 CGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGA 21847 Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490 || |||||||||||| |||||| ||| Sbjct 21846 CT-GGGCGTAAAGGGCACGTAGGCGGT 21821 >seq8992 Length=393971 Score = 172 bits (190), Expect = 2e-40 Identities = 168/214 (79%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 264 CTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAAC 323 ||||||||||||||||||||||||||| || ||||||| ||||||||| | ||||| Sbjct 148458 CTCCTACGGGAGGCAGCAGTGGGGAATTTTCTGCAATGGGTGAAAGCCTGACGGAGCAAT 148399 Query 324 GCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATG 381 |||||||| | |||||||| |||||||| || ||| | | | ||||| |||| Sbjct 148398 GCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATG 148339 Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 |||||| || ||| |||| ||||||||| |||||||||||||||||||||| ||| Sbjct 148338 ACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGG 148279 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAA 475 || |||||||| ||||| | | ||||||||| Sbjct 148278 ATGCATGCGTTATCTGGAATGA-TTGGGCGTAAA 148246 >seq10441 Length=360675 Score = 140 bits (154), Expect = 1e-30 Identities = 150/196 (77%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 307 AAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCC 366 |||||||| | ||||| |||||||| | |||||||| |||||||| || ||| | | Sbjct 278768 AAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTC 278709 Query 367 TCAAGGAAGAT--AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAG 424 | ||||| |||||||||| || ||| |||| ||||||||| ||||||||| Sbjct 278708 CCGGAGAAGAAGCAATGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAA 278649 Query 425 CCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTA 484 |||||||||||| ||| || |||||||||| ||| || | |||||||||| | ||| Sbjct 278648 CCGCGGTAATACAGAGGATGCAAGCGTTATCCAGAA-TAATTGGGCGTAAAGCATCTGTA 278590 Query 485 GGTGGTTTCTTAAGTC 500 ||||| || ||||||| Sbjct 278589 GGTGGCTTTTTAAGTC 278574 >seq3137 Length=1031529 Score = 134 bits (148), Expect = 4e-29 Identities = 97/112 (87%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 640640 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 640699 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACG 271 |||||||| ||||| |||||| ||| |||||||||| | ||| ||||||||| Sbjct 640700 CTGAGAGGATGATCAGCCACACTGGGACTGAGACACAGCCCAGACTCCTACG 640751 >seq3906 Length=99322 Score = 123 bits (136), Expect = 7e-26 Identities = 97/115 (84%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 || ||||||||||||||||||| ||| || |||||||||||||| ||||||||| | Sbjct 85310 CGTGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGTTGGT 85251 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGA 274 | |||||| ||||| ||||| | |||||||||||||| ||| |||||||||||| Sbjct 85250 CCGAGAGGATGATCAACCACACT-GAACTGAGACACGGCCCAGACTCCTACGGGA 85197 >seq818 Length=518547 Score = 105 bits (116), Expect = 2e-20 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 ||||||||||||||||||| || ||| || |||||| |||||| |||||||||| | Sbjct 122896 CGCGTCTGATTAGCTAGTTAGTGAGGCAATAGCTTACTGAGGCGATGATCAGTAGCTGGT 122837 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAA 262 |||||||| ||||| |||||| ||| | ||||||||| |||| Sbjct 122836 CTGAGAGGATGATCAGCCACACTGGGATTGAGACACGCCCCAA 122794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497131236224