Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1175 268 2e-69 seq8453 250 6e-64 seq10441 242 9e-62 seq6947 170 5e-40 seq5170 161 2e-37 seq8992 82.4 2e-13 seq10681 75.2 3e-11 seq2911 73.4 1e-10 >seq1175 Length=20146 Score = 268 bits (296), Expect = 2e-69 Identities = 304/405 (75%), Gaps = 2/405 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||||||||| |||||||||||||||||||||| ||| || ||| Sbjct 2317 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 2258 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | ||||||||||| || |||||||| || ||||||| | || ||| Sbjct 2257 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 2198 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | ||| |||| ||| ||||||| Sbjct 2197 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACAGTAGGGGCA 2138 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| | ||| |||| ||||||||||||| || | |||||||| || ||| Sbjct 2137 GAGGGAATTTCCGGTGGAGCGATGAAATGCGTAGAGATCGAAAAGAACACCAACGGTGAA 2078 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || |||||| | | |||||||||||| ||||||| ||||||| || ||||| Sbjct 2077 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 2018 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363 |||||||| ||||||| ||||||||||||| |||||||| | | | ||| || | Sbjct 2017 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCC 1959 Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | |||| | ||| ||||| ||||||| || ||||||||||| Sbjct 1958 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 1914 >seq8453 Length=8773 Score = 250 bits (276), Expect = 6e-64 Identities = 300/405 (74%), Gaps = 2/405 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||||||||| ||||||||||| || ||||||| ||| || ||| Sbjct 8327 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCTGCAGTAATACAGAGGATGCAAGC 8268 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||| ||||| | ||||||||||| || |||||||| || ||||||| | || ||| Sbjct 8267 GTTATCTGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCTGCCGTCAAA 8208 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | ||| |||| | ||||||| Sbjct 8207 TCCCAAGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTATGGTAGGGGCA 8148 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| | |||| |||||||||||||||||| || | | |||||||| || || Sbjct 8147 TAGGGAATTTCCAGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGAAAA 8088 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || |||||| | | |||||||||||| |||||| ||||||| || ||||| Sbjct 8087 AGCACTCTGCTGGGCCGACACTGACACTGAGAGATGAAAGCTAGGGGAGCGAATGGGATT 8028 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363 |||||||| ||||||| |||||||| |||| |||||||| | | ||| || || | Sbjct 8027 AGATACCCCAGTAGTCCTAGCCGTAAATGATGGATACTAGG-CACTGTGCGTATCAACTC 7969 Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | |||| ||| ||||| ||||||| |||||||||||||| Sbjct 7968 GTGCAGTGCTATAGCTAACGCGTTAAGTATCCCACCTGGGGAGTA 7924 >seq10441 Length=360675 Score = 242 bits (268), Expect = 9e-62 Identities = 300/408 (74%), Gaps = 8/408 (2%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||||||||| ||||||||| |||||||||||| ||| || ||| Sbjct 278683 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAACCGCGGTAATACAGAGGATGCAAGC 278624 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 ||||||| |||| | ||||||||||| | |||||||| || ||||||| | | ||| Sbjct 278623 GTTATCCAGAATAATTGGGCGTAAAGCATCTGTAGGTGGCTTTTTAAGTCTGCCATCAAA 278564 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | ||||||| || || || | |||||| | ||| |||| | | ||||||| Sbjct 278563 TCCCAGGGCTCAAACCTGGATAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 278504 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| || ||| |||||||||||| ||||| || | | |||||||| | |||| Sbjct 278503 GAGGGAATTTCTGGTGGAGCGGTGAAATGAGTAGAGATCGGAAAGAACACCAACGACGAA 278444 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || |||||| | |||||||||||| ||||||| ||||||| || ||||| Sbjct 278443 AGCACTCTGCTGGGCCAACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 278384 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGC 364 |||| ||| ||||||| ||||||||||||| |||||||| || | ||| || || Sbjct 278383 AGATCCCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGT-TGTGCGTAT---TGA 278328 Query 365 TCCG----GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| |||| | ||| ||||| ||||||| || ||||||||||| Sbjct 278327 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 278280 >seq6947 Length=157366 Score = 170 bits (188), Expect = 5e-40 Identities = 230/317 (73%), Gaps = 10/317 (3%) Strand=Plus/Minus Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61 ||| ||||| |||||||||||||||| |||||||||||||||||||| ||| |||||| Sbjct 21923 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCA 21864 Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 || ||| | |||||| ||||||||||||||| |||||| ||| | || | ||| Sbjct 21863 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTG 21804 Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177 |||| | | | || | | ||| |||| | ||||| | || || ||||| Sbjct 21803 AAAGTC---GCCAAAAACTGGTGGAATGCTCTCGAAACCAATTCA---CTTGAGTGAGAC 21750 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || ||||||||| | |||||| |||||||| || |||| | | |||||| ||| Sbjct 21749 AGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAA 21690 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 |||||||| ||| |||| || ||| ||| | ||||||| |||||||| || Sbjct 21689 AAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGAGTGCGAAAGCATGGGGAGCGAA 21630 Query 298 CAGGATTAGATACCCTG 314 | ||||||||| |||| Sbjct 21629 CGGGATTAGATCTCCTG 21613 >seq5170 Length=1600330 Score = 161 bits (178), Expect = 2e-37 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||||||||| ||||||||||||||||||| || ||| | ||| Sbjct 1499396 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAAACAGAGGATGTAAGC 1499337 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | ||||||||||| | |||||||| || ||||||| | || ||| Sbjct 1499336 GTTATCCGGAATGATTGGGCGTAAAGCATCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 1499277 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | ||| |||| | | ||||||| Sbjct 1499276 TCCCAGGGCTCAACCCTGGATAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 1499217 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACA 233 |||||| || ||| |||||||||||||||||| || || | ||||| Sbjct 1499216 GAGGGAATTTCTGGTGGAGCGGTGAAATGCGTAGAGATCAGAAAGAACA 1499168 >seq8992 Length=393971 Score = 82.4 bits (90), Expect = 2e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||||||||| |||||||||||||||||||||| ||| || || Sbjct 148330 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCATGC 148271 Query 65 GTTATCCGGAATTACTGGGCGTAAA 89 |||||| ||||| | |||||||||| Sbjct 148270 GTTATCTGGAATGATTGGGCGTAAA 148246 >seq10681 Length=290680 Score = 75.2 bits (82), Expect = 3e-11 Identities = 69/86 (80%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 30 GTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAA 89 |||| ||||||||||||||||| ||| || ||| |||||| |||| | | |||||||| Sbjct 41314 GTGCTAGCAGCCGCGGTAATACAGAGGATGCAAGCTTTATCCAGAATGATTAGGCGTAAA 41373 Query 90 GGGTGCGTAGGTGG-TTTCTTAAGTC 114 | || ||| |||| ||| ||||||| Sbjct 41374 GCGTCTGTATGTGGCTTTTTTAAGTC 41399 >seq2911 Length=418604 Score = 73.4 bits (80), Expect = 1e-10 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 285 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 |||||| ||| ||| |||||| |||||||||||||||| |||||||||||||| Sbjct 22324 CGTGGGTAGCGAACGGGATTAAATACCCTGGTAGTCCATGCCGTAAACGATGA 22376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202823386368