Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq9208 309 6e-82 seq7644 253 4e-65 seq17453 150 3e-34 seq15254 100 5e-19 >seq9208 Length=86431 Score = 309 bits (342), Expect = 6e-82 Identities = 229/264 (87%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||| Sbjct 44961 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGG 45019 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 45020 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 45079 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 45080 CTATAGCCTTGGCCGATAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGA 45138 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct 45139 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 45198 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 45199 TTGACTACGTCCCTGCCCTTTGTA 45222 >seq7644 Length=985120 Score = 253 bits (280), Expect = 4e-65 Identities = 214/260 (82%), Gaps = 11/260 (4%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||||||| Sbjct 799066 GCTTCTTAGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGGTCTG 799124 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 ||||||||||||||| ||| ||||||||||||||||||||| | |||||||| || Sbjct 799125 TGATGCCCTTAGATGCTCTACGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTAT 799184 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 ||||||||| ||| | |||||||| || ||||| |||||||||| ||| Sbjct 799185 AGCCTTGGCCGATAGGCTCGAGTAATCTT-------TC-ATCGTGATGGGGATAGATCAT 799236 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||| ||| ||||||||| ||||| |||||||||||| ||||||||| |||||||| Sbjct 799237 TGTAATTGTTGGTCTTCAACGGGGAATTCCTAGTAAGCGCAAGTCATCAGCTCGCGTTGA 799296 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||| ||||||||||||||| Sbjct 799297 CTACATCCCTGCCCTTTGTA 799316 >seq17453 Length=238 Score = 150 bits (166), Expect = 3e-34 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195 ||||||||| | |||| ||||||||||||||||||| | || || || | | ||| Sbjct 238 CTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTAC 179 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||||||| Sbjct 178 GCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATT 119 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| ||| Sbjct 118 ATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTC 59 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 58 CCTGCCCTTTGTA 46 >seq15254 Length=220 Score = 100 bits (110), Expect = 5e-19 Identities = 85/101 (84%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 114 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 171 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| | |||| ||||||||||||||||||| Sbjct 172 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAC 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946903516928