Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07]
31,301 sequences; 320,378,613 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq9208 309 6e-82
seq7644 253 4e-65
seq17453 150 3e-34
seq15254 100 5e-19
>seq9208
Length=86431
Score = 309 bits (342), Expect = 6e-82
Identities = 229/264 (87%), Gaps = 4/264 (2%)
Strand=Plus/Plus
Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124
||| |||||||||||||||||| | ||| | ||| | ||||||||||||||||||||||
Sbjct 44961 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGG 45019
Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 45020 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 45079
Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244
|| ||||||||| ||| | |||||||||| | ||| | ||||| ||||||||||
Sbjct 45080 CTATAGCCTTGGCCGATAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGA 45138
Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304
|||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| ||||
Sbjct 45139 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 45198
Query 305 TTGATTACGTCCCTGCCCTTTGTA 328
|||| |||||||||||||||||||
Sbjct 45199 TTGACTACGTCCCTGCCCTTTGTA 45222
>seq7644
Length=985120
Score = 253 bits (280), Expect = 4e-65
Identities = 214/260 (82%), Gaps = 11/260 (4%)
Strand=Plus/Plus
Query 71 GCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128
|||||||||||||||||| | ||| | ||| | ||||||||||||||||||||||||||
Sbjct 799066 GCTTCTTAGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGGTCTG 799124
Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188
||||||||||||||| ||| ||||||||||||||||||||| | |||||||| ||
Sbjct 799125 TGATGCCCTTAGATGCTCTACGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTAT 799184
Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248
||||||||| ||| | |||||||| || ||||| |||||||||| |||
Sbjct 799185 AGCCTTGGCCGATAGGCTCGAGTAATCTT-------TC-ATCGTGATGGGGATAGATCAT 799236
Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308
|| |||| ||| ||||||||| ||||| |||||||||||| ||||||||| ||||||||
Sbjct 799237 TGTAATTGTTGGTCTTCAACGGGGAATTCCTAGTAAGCGCAAGTCATCAGCTCGCGTTGA 799296
Query 309 TTACGTCCCTGCCCTTTGTA 328
||| |||||||||||||||
Sbjct 799297 CTACATCCCTGCCCTTTGTA 799316
>seq17453
Length=238
Score = 150 bits (166), Expect = 3e-34
Identities = 149/193 (77%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195
||||||||| | |||| ||||||||||||||||||| | || || || | | |||
Sbjct 238 CTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTAC 179
Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255
||||| ||| |||||| | | || | | ||||| ||||||| | | |||||||||
Sbjct 178 GCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATT 119
Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315
||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| |||
Sbjct 118 ATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTC 59
Query 316 CCTGCCCTTTGTA 328
|||||||||||||
Sbjct 58 CCTGCCCTTTGTA 46
>seq15254
Length=220
Score = 100 bits (110), Expect = 5e-19
Identities = 85/101 (84%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 114 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 171
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|||||||||||||| | |||| |||||||||||||||||||
Sbjct 172 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAC 212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946903516928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |