Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq7998 123 5e-26 seq8453 120 6e-25 seq1175 105 1e-20 seq1744 93.3 8e-17 seq11713 80.6 5e-13 seq7396 77.0 6e-12 >seq7998 Length=612300 Score = 123 bits (136), Expect = 5e-26 Identities = 176/243 (72%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| |||| || ||| | ||| |||| Sbjct 21820 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAATAAGCGACGAAATGCTTCGGG 21879 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | |||||| ||||| |||||| || |||| ||| | Sbjct 21880 GAGTT-GAAAATAAGCGGAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCGAA 21932 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 21933 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 21989 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 21990 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 22049 Query 249 CCT 251 ||| Sbjct 22050 CCT 22052 >seq8453 Length=8773 Score = 120 bits (132), Expect = 6e-25 Identities = 175/243 (72%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| |||| || ||| | ||| |||| Sbjct 4735 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAATAAGCGACGAAATGCTTCGGG 4676 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | |||||| ||||| |||||| || |||| ||| | Sbjct 4675 GAGTT-GAAAATAAGCGGAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCGAA 4623 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 4622 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 4566 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| ||| |||||||||||| || Sbjct 4565 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCAAGCGAAATGGGAGCAG 4506 Query 249 CCT 251 ||| Sbjct 4505 CCT 4503 >seq1175 Length=20146 Score = 105 bits (116), Expect = 1e-20 Identities = 172/243 (71%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | | ||| ||||| |||| || ||| | ||| |||| Sbjct 11132 GGTGGATACCTAGGCACGAAGCGACGAGGAAGGGCGTAATAAGCGACGAAATGCTTCGGG 11191 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | ||||| ||||| | |||| || |||| ||| | Sbjct 11192 GAGTT-GAAAATAAGCGGAGATCCAGAGATTCCTGAATAGGTCAACC------TTTCGAA 11244 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| |||| |||| || ||| ||||||||||||||||| ||| Sbjct 11245 C--TGC-TGCTGAATCCATGGGTAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 11301 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 |||| ||||||||||| || | ||||||| ||||| || || |||||||||| || Sbjct 11302 AGCTAGAGGAAAAGAAAGTAAAAGCGATTCCCGTAGTAGCGGTGAACGAAATGGGAGCAG 11361 Query 249 CCT 251 ||| Sbjct 11362 CCT 11364 >seq1744 Length=154548 Score = 93.3 bits (102), Expect = 8e-17 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 ||||||||||||||||| |||||| ||||||||||| ||| | ||||||| ||||| Sbjct 69914 GGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAG 69855 Query 228 TGGCGAGCGAAATGGGATGAGCCT 251 |||||||||||||||| ||||| Sbjct 69854 CGGCGAGCGAAATGGGAGCAGCCT 69831 >seq11713 Length=479717 Score = 80.6 bits (88), Expect = 5e-13 Identities = 167/243 (69%), Gaps = 17/243 (7%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| |||| || | ||| | ||| |||| Sbjct 41016 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAATAAGTGACGAAATGCTTCGGG 40957 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | |||||| ||||| | |||| || |||| ||| Sbjct 40956 GAGTTAA-AAATAAGTAGAGATCCGAAGATTCCTGAATAGGTCAACC------TTTCAAA 40904 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| | |||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 40903 C--TGC-TACTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 40847 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | | | ||||||| |||||| ||||||| || Sbjct 40846 AGCCAGAGGAAAAGAAAGCAA-----AAGCACGTAGTAGTGACGAGCG-AATGGGAGTAG 40793 Query 249 CCT 251 ||| Sbjct 40792 CCT 40790 >seq7396 Length=851434 Score = 77.0 bits (84), Expect = 6e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 180800 GCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 180741 Query 229 GGCGAGCGAAATGGGAT 245 ||||||||| | |||| Sbjct 180740 GGCGAGCGAGAGCGGAT 180724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918112531616