Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq7998 192 2e-46 seq8453 178 4e-42 seq6950 125 2e-26 >seq7998 Length=612300 Score = 192 bits (212), Expect = 2e-46 Identities = 392/570 (69%), Gaps = 23/570 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 24182 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 24123 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 24122 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 24064 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || || || |||||||||| || Sbjct 24063 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 24004 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || || | |||| | Sbjct 24003 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAG-GAGGCCT--T 23947 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | || ||||||| || | || || || | || |||||| ||| | | |||| Sbjct 23946 CTTCGCCTTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTG 23889 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 23888 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 23829 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 23828 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 23770 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 23769 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 23710 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | ||| ||| || || | | |||| | ||| ||||| Sbjct 23709 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 23656 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 23655 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 23626 >seq8453 Length=8773 Score = 178 bits (196), Expect = 4e-42 Identities = 382/559 (68%), Gaps = 23/559 (4%) Strand=Plus/Plus Query 12 GTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGA 71 |||| ||| |||||||||||| ||| || ||||| | || ||| | | | || Sbjct 2384 GTCTTGCAATCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCATCTGGCCCGA 2443 Query 72 GGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCC 131 || |||||||| |||||||||||| |||||||||| | || |||||| ||||| | Sbjct 2444 GGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCATAGAAACTGTCT 2502 Query 132 ACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATCCACTACGGTCA 188 ||| | |||||||| || || || || |||||||||| || | | || Sbjct 2503 ACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTCTAGCTCTTCCA 2562 Query 189 GAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCATCATAGTCTCCC 245 ||||||||| ||| | | ||| | | || || | |||| || | || || Sbjct 2563 GAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGAAAG-GAGGCCT--TCTTCCCCTTCC 2619 Query 246 ACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCCG-G 302 ||||| || | || || || | || |||||| ||| | ||||||||| | | | Sbjct 2620 ACCTAATCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAATAGTGAAGCTTCATAG 2677 Query 303 GGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGC 362 ||||||| |||| | || | | | ||||| || | |||||||| || Sbjct 2678 GGTCTTTCTGTCCAGGTGCAGGTAGTCCGTATCTTCACAGACATGTTTGTTTCACCGAGC 2737 Query 363 CTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGA 421 || | |||||||| | || |||||||||| ||||||| ||||||||||||||||| Sbjct 2738 CTCTCTCTGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGA 2796 Query 422 CAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAA 481 ||||||||||||||||||||||| |||||||||| |||||||| || |||||||| Sbjct 2797 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTAAGGCCGCCGTTCACCGGGGCTTC-G 2855 Query 482 TTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGG 541 | ||| ||| || || | |||| | ||| |||||||||||| ||| Sbjct 2856 GTCGCCGGCTC-----CCCTGTCATCAAGTCACCAACTTCCTTGACCTTCCAGCACTGGG 2910 Query 542 CAGGCGTCAGTCCGTATAC 560 |||||||||| || |||| Sbjct 2911 CAGGCGTCAGCCCCCATAC 2929 >seq6950 Length=1016052 Score = 125 bits (138), Expect = 2e-26 Identities = 127/164 (77%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 397 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTA 456 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 620443 TTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAGCGTTATAGTTA 620502 Query 457 CCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGA 516 | |||||||| || || ||||| | | ||| ||| || || | | |||| | Sbjct 620503 CGGCCGCCGTTCACCGGTGCTTC-AGTCGCCGGCTC-----CCCTGTCATCAGGTCACCA 620556 Query 517 GTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 ||| ||||||| |||| ||||||||||||| || |||| Sbjct 620557 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 620600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701867131776