Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1175 127 4e-27 seq8453 125 2e-26 seq6947 116 8e-24 seq5170 109 1e-21 seq8992 77.0 7e-12 >seq1175 Length=20146 Score = 127 bits (140), Expect = 4e-27 Identities = 195/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| || ||| ||| Sbjct 2281 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATAC---------------CGT 2325 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || | |||| | ||||||||| || | |||||| ||||| ||| ||||| Sbjct 2326 CATTGCTTCTTTTCCGGGA--AAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGC 2382 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || |||||||||| || ||||| |||| ||||||||||||| Sbjct 2383 GGCATTGCTCCGTCAGGCTTTCGTCCATTGCGGAAAATTCCCCACTACTGCCTCCCGTAG 2442 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 2443 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 2502 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | || ||| || || || | || |||| ||||| Sbjct 2503 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 2541 >seq8453 Length=8773 Score = 125 bits (138), Expect = 2e-26 Identities = 194/278 (70%), Gaps = 18/278 (6%) Strand=Plus/Plus Query 2 GCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGTG 61 ||||||||||| |||||||||||||||||||| || ||| ||| Sbjct 8292 GCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATAC---------------CGTT 8336 Query 62 GAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCT 121 | || | || || |||||||||| || | |||||| ||||| ||| ||||| Sbjct 8337 ATTGCTTCT--TCTCTGGGAAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCG 8393 Query 122 ACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGG 181 | | ||| |||| || || |||||| || ||||| ||||||||||||||||||| Sbjct 8394 GCATTGCTCCGTCAGGCTTTCACCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGG 8453 Query 182 AGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATC 241 ||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||| Sbjct 8454 AGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATC 8513 Query 242 GTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | || ||| || || || | || |||| ||||| Sbjct 8514 ATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 8551 >seq6947 Length=157366 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 21972 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 22031 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 22032 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 22091 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 22092 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 22151 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 22152 GCAGGCTCATCAAACAGCG 22170 >seq5170 Length=1600330 Score = 109 bits (120), Expect = 1e-21 Identities = 191/279 (68%), Gaps = 18/279 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| || ||| || | Sbjct 1499360 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 1499408 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | |||||||||| || | |||||| ||||| ||| || || Sbjct 1499409 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCATGC 1499461 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||| || |||||||||| Sbjct 1499462 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTACTACCTCCCGTAG 1499521 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 1499522 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 1499581 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | || ||| || || || | || |||| ||||| Sbjct 1499582 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 1499620 >seq8992 Length=393971 Score = 77.0 bits (84), Expect = 7e-12 Identities = 126/183 (69%), Gaps = 18/183 (10%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| || ||| || | Sbjct 148294 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 148342 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | |||||||||| || | |||||| ||||| ||| ||||| Sbjct 148343 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGC 148395 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || || |||||| || ||||| |||||||||||||||||| Sbjct 148396 GGCATTGCTCCGTCAGGCTTTCACCCATTGCAGAAAATTCCCCACTGCTGCCTCCCGTAG 148455 Query 181 GAG 183 ||| Sbjct 148456 GAG 148458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068465454912