Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq5170 111 3e-22 seq7644 84.2 4e-14 >seq5170 Length=1600330 Score = 111 bits (122), Expect = 3e-22 Identities = 100/123 (81%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| | ||| || ||| || |||| Sbjct 1138797 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATCGCGTTTGGTTGAAAAGCCAGT 1138854 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||| | ||||||||||| ||||||||||||||||||||||||| || | Sbjct 1138855 GGCACGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAGGCTA 1138914 Query 121 GAA 123 ||| Sbjct 1138915 GAA 1138917 >seq7644 Length=985120 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||| ||||||||| || |||| | ||||||| | || || ||| || |||| Sbjct 777462 GTACGCGAGGAACCGTTGA-TTCACAC-AATTGGTCGTCGCATTTGGTTGAAAAGCCAGT 777519 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| |||||||| | | ||||||||| |||||||||||||||| ||||| || || | Sbjct 777520 GGCGCAAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTAAGAATTCAGGCTA 777579 Query 121 GAA 123 ||| Sbjct 777580 GAA 777582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818951595264