Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3603 226 7e-57 seq2584 176 1e-41 seq1 168 2e-39 seq79 163 7e-38 seq3046 143 7e-32 seq2712 143 7e-32 seq45 122 2e-25 seq54 91.5 4e-16 seq170 87.8 5e-15 >seq3603 Length=163330 Score = 226 bits (250), Expect = 7e-57 Identities = 296/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 109106 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 109165 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 109166 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 109225 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 109226 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACTAAGCTGGAGTACGGTAGG 109285 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 109286 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 109345 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 109346 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 109405 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 109406 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 109465 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 109466 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 109514 Score = 226 bits (250), Expect = 7e-57 Identities = 296/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 146135 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 146076 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 146075 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 146016 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 146015 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACTAAGCTGGAGTACGGTAGG 145956 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 145955 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 145896 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 145895 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 145836 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 145835 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 145776 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 145775 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 145727 >seq2584 Length=2473 Score = 176 bits (194), Expect = 1e-41 Identities = 263/374 (70%), Gaps = 2/374 (1%) Strand=Plus/Plus Query 38 GCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGC 97 |||||||||||||||| ||| |||||| |||| |||||| | |||||||||||||| Sbjct 1564 GCAGCCGCGGTAATACAGAGGATGCAAGTGTTATCCGGAATGATTGGGCGTAAAGCGTCY 1623 Query 98 GCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGT 157 | ||| || | | ||| | | || ||||||| ||||| |||| ||| || | | Sbjct 1624 GTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGA 1683 Query 158 GACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCG 217 ||| | || |||| | || || | |||||| | ||| ||| |||||||||| Sbjct 1684 AACTACTAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCG 1743 Query 218 TAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCAT 277 |||| || | | ||||||||| |||||| ||| | ||||| |||||||| || | Sbjct 1744 TAGAGATCGGAAAGAACACCAAHGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAG 1803 Query 278 GCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | |||||| ||||||| || ||||||||||||| ||||||| ||| |||||||| Sbjct 1804 AGATGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCRTAAACGAT 1863 Query 338 ATCAACTAGTTGTTGGGGATTTACTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGAC 395 ||||| |||| | | | || || || |||||||| || | |||| | Sbjct 1864 GGATACTAGGCGTTGTGTGTATCGACCCGTGCAGTGCTGTAGCTAATGCATTAAGTATCC 1923 Query 396 CGCCTGGGGAATAC 409 |||||||| | ||| Sbjct 1924 CGCCTGGGAAGTAC 1937 >seq1 Length=14325340 Score = 168 bits (186), Expect = 2e-39 Identities = 236/330 (72%), Gaps = 6/330 (2%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| |||| ||||||||||||||||| ||| ||||||||||| Sbjct 1321989 GAATAAGCATCGGCTAACTTTGTGCAAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTA 1321930 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 || ||| | ||||||||||| || | ||| || | | ||| | | || ||||||| Sbjct 1321929 TCCGAAATGATTGGGCGTAAAGTGTCTGTAGGTGGCTTTTCAAGTCTGCCGTCAAATCCC 1321870 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTG---ACTGCACGACTAGAGTGTGTCAGAGGGGG 187 ||| |||| ||| | | ||| ||| | ||| | | | ||||| | Sbjct 1321869 AAGGCACAACCCTGGACAGG---TGGTGAAAACTACTAAGCTATAATACGGTAGAGGCAG 1321813 Query 188 GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAG 247 |||||| | ||| ||| |||||||||||||| || | |||||||||||||||| Sbjct 1321812 AGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGAAAAGAACACCAATGGCGAAA 1321753 Query 248 GCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTA 307 ||| | ||||| |||||||| || | |||||||| |||||| || |||||| Sbjct 1321752 GCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGTGAATCGGATTA 1321693 Query 308 GATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||| ||||||| | | |||||||| Sbjct 1321692 GATACCACAGTAGTCCTAGTCGTAAACGAT 1321663 >seq79 Length=2879232 Score = 163 bits (180), Expect = 7e-38 Identities = 221/308 (72%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||| || |||||||||||| ||| ||| Sbjct 495710 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAACAACCGCGGTAATACAGAGGATGC 495769 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| ||||||| | || || |||||||| | | | || | | ||| | | || Sbjct 495770 AAGCGTTATTCGGAATGATTGAGCATAAAGCGTTTGTAAGTGGCTTTTCAAGTCCGCCGT 495829 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 495830 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACTAAGCTGGAGTACGGTAGG 495889 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||| | ||| ||| |||||||||||||| || | | |||||||||||| Sbjct 495890 GGCAAAGGAAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAATGG 495949 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 495950 CGAAAGCACTCTACTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 496009 Query 303 GATTAGAT 310 |||||||| Sbjct 496010 GATTAGAT 496017 Score = 91.5 bits (100), Expect = 4e-16 Identities = 128/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 233 ACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGG 292 ||||||| ||| || ||| | ||||| |||||||| || | |||||||| ||| Sbjct 493931 ACACCAACGGCAAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGG 493990 Query 293 GAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG 352 |||| || ||||||||||||| ||||||| ||| |||||||| ||||| | || Sbjct 493991 GAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTG 494050 Query 353 GGGATTTACTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | | | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 494051 TGHGTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 494109 >seq3046 Length=1400 Score = 143 bits (158), Expect = 7e-32 Identities = 99/112 (88%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 1287 TACCTTCAGAGGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 1346 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAG 114 |||||||| ||||||||||||||||||||||| || |||| | | |||||| Sbjct 1347 AAGCGTTATTCGGAATTACTGGGCGTAAAGCGCACGTAGGCCGCTTTGTAAG 1398 >seq2712 Length=1975 Score = 143 bits (158), Expect = 7e-32 Identities = 177/244 (73%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||| |||||| |||||||||| ||| ||| Sbjct 1931 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCMAGCAGCMGCGGTAATACAGAGGATGC 1872 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 1871 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 1812 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 1811 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACTAAGCTGGAGTACGGTAGG 1752 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 1751 GGCAGAGGGAATTTCHGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 1692 Query 243 CGAA 246 ||| Sbjct 1691 TGAA 1688 >seq45 Length=4419648 Score = 122 bits (134), Expect = 2e-25 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| ||||||| |||||||||||||| ||| ||| Sbjct 2968581 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGTAGCCGCGGTAATACAGAGGATGC 2968522 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 2968521 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 2968462 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 2968461 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACTAAGCTGGAGTACGGTAGG 2968402 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATAT 224 || | |||||| | || ||| |||||||| ||||| || Sbjct 2968401 GGCAGAGGGAATTTCCGATGGAGCGGTGAAATGTGTAGAGAT 2968360 >seq54 Length=3994441 Score = 91.5 bits (100), Expect = 4e-16 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 ||| ||||| | ||||| | ||| |||| |||||| ||||||| || |||| | Sbjct 3497586 ACTTGAGTGAGATAGAGGAGAGTGCAATTTTGAGTGTAGGGGTGAAATTCGGAGATCTAC 3497527 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 | |||||| |||| ||||||||||| ||||| || |||||| | |||||| Sbjct 3497526 GAAGGAACGCCAAAAGCGAAGGCAGCTSTCTGGGTCCCTACCGACGCTGGGGTGCGAAAG 3497467 Query 287 CGTGGGGAGCAAACAGGATTAGAT 310 | |||||||| ||||||||||||| Sbjct 3497466 CATGGGGAGCGAACAGGATTAGAT 3497443 >seq170 Length=1268841 Score = 87.8 bits (96), Expect = 5e-15 Identities = 173/256 (68%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 |||||||||||||| ||| || | | ||| | | ||| |||||| ||||| |||| Sbjct 1200054 TGGGCGTAAAGCGTTTATAGGTGGCTTTTCAAGTCCGCTGTCAAATCCGAGGGCTCAACC 1199995 Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201 ||| | | | | ||| | | |||| || || || |||||| | || Sbjct 1199994 CTGGACAGGTAGTGGAAACTACTAAGTTGGAGTATGGTAGGGGCAAAGGGAATTTCCAGT 1199935 Query 202 GTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGA 261 | ||| |||||||||||||| || | | ||||||||| | | || ||| | || | Sbjct 1199934 GGAGCGGTGAAATGCGTAGAGATCAGAAAGAACACCAACGACAAAAGCACTCTGTTGTGC 1199875 Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 ||| |||| || | |||||||| ||||||| || ||||||||||||| ||||| Sbjct 1199874 CGACATTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGT 1199815 Query 322 CCACGCCCTAAACGAT 337 || || |||| ||| Sbjct 1199814 CCTAGCTGTAAATGAT 1199799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289553535712