Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq327 75.2 5e-12 seq62 71.6 6e-11 >seq327 Length=402351 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| |||| |||||||| Sbjct 280279 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 280337 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| ||||||||| || |||| |||| |||||||| Sbjct 99385 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCAAGCGAACCGGGATCAGCCCAGC 99443 >seq62 Length=3435397 Score = 71.6 bits (78), Expect = 6e-11 Identities = 45/49 (92%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGA 49 ||||||||||||||| ||||||||| ||||||||||||||||| |||| Sbjct 3402505 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAACCGGGA 3402457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230392217520