Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08]
3,603 sequences; 804,647,751 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq327 75.2 5e-12
seq62 71.6 6e-11
>seq327
Length=402351
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| |||||||||||| |||| |||| ||||||||
Sbjct 280279 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 280337
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| ||||||||| ||||||||| || |||| |||| ||||||||
Sbjct 99385 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCAAGCGAACCGGGATCAGCCCAGC 99443
>seq62
Length=3435397
Score = 71.6 bits (78), Expect = 6e-11
Identities = 45/49 (92%), Gaps = 0/49 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGA 49
||||||||||||||| ||||||||| ||||||||||||||||| ||||
Sbjct 3402505 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAACCGGGA 3402457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230392217520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |