Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15]
37,194 sequences; 2,365,682,703 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq2209 127 2e-27
seq1692 127 2e-27
seq288 127 2e-27
seq45 127 2e-27
seq9 127 2e-27
seq7 127 2e-27
seq3 127 2e-27
seq2 127 2e-27
seq7036 123 2e-26
seq382 123 2e-26
seq8 118 9e-25
seq1 118 9e-25
seq900 116 3e-24
seq19414 114 1e-23
seq4704 107 2e-21
seq44 105 6e-21
seq1080 104 2e-20
seq2507 96.9 3e-18
seq150 96.9 3e-18
seq244 84.2 2e-14
seq76 84.2 2e-14
seq3031 80.6 2e-13
seq12 75.2 9e-12
>seq2209
Length=192579
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 183901 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 183842
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 183841 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 183782
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 183781 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 183742
>seq1692
Length=237071
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 153556 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 153497
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 153496 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 153437
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 153436 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 153397
>seq288
Length=624745
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 499116 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 499175
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 499176 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 499235
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 499236 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 499275
>seq45
Length=1533694
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 822958 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 822899
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 822898 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 822839
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 822838 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 822799
>seq9
Length=50975570
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 43868115 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 43868056
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 43868055 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 43867996
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 43867995 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 43867956
>seq7
Length=114765206
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 99184375 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 99184434
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 99184435 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 99184494
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 99184495 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 99184534
Score = 114 bits (126), Expect = 1e-23
Identities = 122/160 (76%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| |
Sbjct 65602456 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTTGCTCCGCCTTACAA 65602514
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| || ||| |||| | ||||| || ||||||| |||| ||||||||||||||
Sbjct 65602515 CCTTGCTTCCCATTGTAATTGCCATTATAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 65602574
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||||||||||||||||||||||| || | ||||
Sbjct 65602575 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 65602614
Score = 89.7 bits (98), Expect = 4e-16
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 75 TGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGT 134
|||| | |||||||| ||||||| |||| |||||||||||||| |||||||||||
Sbjct 86986540 TGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATACGGACTTGACGT 86986599
Query 135 CATCCCCACCTTCCTCCGGTTTGTCAC 161
|||||||||||||||| || | ||||
Sbjct 86986600 CATCCCCACCTTCCTCTAGTATATCAC 86986626
>seq3
Length=72893213
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 30592232 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 30592291
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 30592292 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 30592351
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 30592352 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 30592391
Score = 91.5 bits (100), Expect = 1e-16
Identities = 100/132 (76%), Gaps = 1/132 (1%)
Strand=Plus/Minus
Query 17 AATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTG 76
|| ||| ||| | || |||||||| ||| ||||| ||| || | | || ||| ||
Sbjct 67836472 AAGCCGAACTGAGGTAATCTTTCTGG-ATTCGCTCCGCCTTGCAGCCTTGCTTCCCATTG 67836414
Query 77 TATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCA 136
|| | |||||||| ||||||| |||| ||||||||||||||| |||| ||| ||||
Sbjct 67836413 TAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACATGATGTCA 67836354
Query 137 TCCCCACCTTCC 148
| ||||||||||
Sbjct 67836353 TTCCCACCTTCC 67836342
>seq2
Length=96359640
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 41813766 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 41813825
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 41813826 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 41813885
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 41813886 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 41813925
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||| | ||| | ||| |||| ||||||| |||||||||
Sbjct 13656044 CGAGTTGCAGCCTGCAATCTGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 13655985
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 13655984 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 13655925
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 13655924 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 13655885
Score = 98.7 bits (108), Expect = 8e-19
Identities = 120/161 (75%), Gaps = 2/161 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACAC-TTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||| ||| ||||| ||| | ||| ||| |||| ||||||| ||| ||||
Sbjct 37110157 CGAGTTGCAGCCTAAAATCCAAACTGAGG-ACAGGTTTTTGGGGTTAGCTCACCCACGCG 37110215
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | ||| |||| | | ||| |||| ||||||| |||| |||||||| ||
Sbjct 37110216 AGATCGCGACCCTTTATCCCAGCCACTGTAGCACGTGTGTCGCCCCGGGCATAAGGGGCA 37110275
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| |||||||| |||||| |||||||||||| || ||||
Sbjct 37110276 TGATGACTTGACATCATCCTCACCTTCCTCCGACTTATCAC 37110316
>seq7036
Length=32397
Score = 123 bits (136), Expect = 2e-26
Identities = 124/160 (78%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | |
Sbjct 30124 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTTGCTCCGCCTTACAG 30182
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| || ||| |||| | |||||||| ||||||| |||| ||||||||||||||
Sbjct 30183 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 30242
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||||||||||||||||||||||| || | ||||
Sbjct 30243 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 30282
>seq382
Length=549772
Score = 123 bits (136), Expect = 2e-26
Identities = 124/160 (78%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | |
Sbjct 168274 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 168332
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| || ||| |||| | |||||||| ||||||| |||| ||||||||||||||
Sbjct 168333 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 168392
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||||||||||||||||||||||| || | ||||
Sbjct 168393 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 168432
>seq8
Length=47755514
Score = 118 bits (130), Expect = 9e-25
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 35511605 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 35511664
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| | |||||||| | ||||| ||| |||||||| |||
Sbjct 35511665 GATCGCGACCCTTTGTCTCGGCCATTGTAGCAAGTGTGTCACCCAGGGCATAAGGGGCAT 35511724
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||| ||||| ||||||||||||| || ||||
Sbjct 35511725 GATGACTTGACGCCATCCTCACCTTCCTCCGGCTTATCAC 35511764
Score = 84.2 bits (92), Expect = 2e-14
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 93 ACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152
||||||| | || ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 17210243 ACGTGTGTGGTCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCTCCA 17210184
Query 153 GTTTGTCAC 161
|| | ||||
Sbjct 17210183 GTATATCAC 17210175
>seq1
Length=110538649
Score = 118 bits (130), Expect = 9e-25
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| | | | ||| |||| ||||||| ||||||||
Sbjct 62090431 CGAGTTGCAGCCTGCAATCCGAATTGAGGACGGGTTTTTGGGGTTAGCTCATCCTCGCGG 62090490
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| | |||||||| ||||||| |||| |||||||| |||
Sbjct 62090491 GATCGCGACCCTTTGTCTCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 62090550
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| |||||||||| || || ||||
Sbjct 62090551 GATGACTTGACGTCATCCTCACCTTCCTCTGGCTTATCAC 62090590
Score = 84.2 bits (92), Expect = 2e-14
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142
|||||||| ||||||| |||| |||||||| ||||| ||||||||||||||| ||
Sbjct 21437091 CCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCA 21437150
Query 143 CCTTCCTCCGGTTTGTCAC 161
||||||||||| || ||||
Sbjct 21437151 CCTTCCTCCGGCTTATCAC 21437169
>seq900
Length=353159
Score = 116 bits (128), Expect = 3e-24
Identities = 121/159 (76%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||| || || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 60866 CGAGTTGTAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 60807
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| ||| ||| ||||||| ||||||| ||||| | |||| ||| |||
Sbjct 60806 GATCGCGAACCTTTGTCCCGGTCATTGTAGCACGTGTGTAGCCCAAGGCATAGGGGGCAT 60747
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160
|| ||||||||||||||| ||||||||||||| || |||
Sbjct 60746 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCA 60708
>seq19414
Length=5819
Score = 114 bits (126), Expect = 1e-23
Identities = 101/126 (80%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 36 TTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACG 95
||| |||| ||||||| |||||||||| | ||| |||| ||| |||||||| |||
Sbjct 5807 TTTTTGGGGTTAGCTCACCCTCGCGGGATCGCGACCCTTTGTCCCGGCCATTGTAGCACG 5748
Query 96 TGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTT 155
|||| |||| |||||||| ||||| ||||||||||||||| ||||||||||||| |
Sbjct 5747 TGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCT 5688
Query 156 TGTCAC 161
| ||||
Sbjct 5687 TATCAC 5682
>seq4704
Length=80775
Score = 107 bits (118), Expect = 2e-21
Identities = 122/161 (76%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACAC-TTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||| | ||||||| ||| | ||| ||| | || ||||||| ||||||||
Sbjct 42450 CGAGTTGCAGCTTGCAATCCGAACTGAGG-ACAGGTTTTTAGGGTTAGCTCACCCTCGCG 42392
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
|| | ||| |||| ||| ||||||||| ||||||| ||| |||||||| ||
Sbjct 42391 GGATCGCGACCCTTTGTCCTAACCATTGTAGCACGTGTGTCACCCAGGGCATAAGGGGCA 42332
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||||||| ||||| | ||||||||||| | ||||
Sbjct 42331 TGATGACTTGACGACATCCTCGCCTTCCTCCGGCATATCAC 42291
>seq44
Length=1539746
Score = 105 bits (116), Expect = 6e-21
Identities = 93/116 (80%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 46 TAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCC 105
|||||| |||||||||| | ||| |||| ||| |||||||| ||||||| ||||
Sbjct 816133 TAGCTCACCCTCGCGGGATCGCGACCCTTTGTCCCAGCCATTGTAGCACGTGTGTCGCCC 816192
Query 106 TACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|||||||| ||||| ||||||||||||||| ||||||||||||| || ||||
Sbjct 816193 AGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 816248
>seq1080
Length=318062
Score = 104 bits (114), Expect = 2e-20
Identities = 112/147 (76%), Gaps = 1/147 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 6898 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 6839
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 6838 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 6779
Query 122 GAGGACTTGACGTCATCCCCACCTTCC 148
|| ||||||||||||||| || |||||
Sbjct 6778 GATGACTTGACGTCATCCTCA-CTTCC 6753
>seq2507
Length=172204
Score = 96.9 bits (106), Expect = 3e-18
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 36 TTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACG 95
||| |||| |||| || |||| ||||| | || |||| | | |||||||| |||
Sbjct 82795 TTTTTGGGGTTAGTTCACCCTTGCGGGATCACGACCCTTTATCCCGGCCATTGTAGCACG 82854
Query 96 TGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTT 155
|||| |||| |||||||| ||||| ||||||||||||||| ||||||||||||| |
Sbjct 82855 TGTGTCGCCCAGGACATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCT 82914
Query 156 TGTCAC 161
| ||||
Sbjct 82915 TATCAC 82920
>seq150
Length=865971
Score = 96.9 bits (106), Expect = 3e-18
Identities = 118/160 (74%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||||||| | |||||| ||| | | ||||| | ||| ||||| ||| | |
Sbjct 91921 CGAGTTGCAGAGAAAAATCCGAACTGAGGCAATCTTTCCAG-ATTCGCTCCGCCTTACAG 91979
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| || ||| |||| | ||||| ||||||| |||| ||||||||||||||
Sbjct 91980 CCTTGCTTCCCATTGTAATTGTTGTTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 92039
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||| ||||||||||||||||||| || | ||||
Sbjct 92040 GCGGACTTGATGTCATCCCCACCTTCCTCCAGTATATCAC 92079
>seq244
Length=670439
Score = 84.2 bits (92), Expect = 2e-14
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 58 GCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGG 117
||||| | ||| |||| | | ||||||||| || |||| |||| ||||||||
Sbjct 255872 GCGGGATCGCGACCCTTTATCCCGACCATTGTAGCACATGTGTCGCCCAGGGCATAAGGG 255931
Query 118 CCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||||| ||||||||||||||| ||||||||||||| || ||||
Sbjct 255932 GCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 255975
>seq76
Length=1158310
Score = 84.2 bits (92), Expect = 2e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142
|||||||| ||||||| |||| | |||||||| ||||| ||||||||||||||| ||
Sbjct 1109617 CCATTGTAGCACGTGTGCCGCCCGAGGCATAAGGGGCATGATGACTTGACGTCATCCTCA 1109676
Query 143 CCTTCCTCCGGTTT 156
||||||||||| ||
Sbjct 1109677 CCTTCCTCCGGCTT 1109690
>seq3031
Length=143860
Score = 80.6 bits (88), Expect = 2e-13
Identities = 66/79 (84%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142
|||||||| | |||| |||| ||||||||||||||| | |||||||||||||||||
Sbjct 76775 CCATTGTAGCGCATGTGTGGCCCAGCCCATAAGGGCCATGTG-ACTTGACGTCATCCCCA 76833
Query 143 CCTTCCTCCGGTTTGTCAC 161
||||||||| || | ||||
Sbjct 76834 CCTTCCTCCAGTATATCAC 76852
>seq12
Length=53491057
Score = 75.2 bits (82), Expect = 9e-12
Identities = 58/69 (84%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 93 ACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152
||||||| |||| |||||||| ||||| ||||||||||||||| ||||||||||||
Sbjct 31759906 ACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCG 31759847
Query 153 GTTTGTCAC 161
| || ||||
Sbjct 31759846 GCTTATCAC 31759838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415850108180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |