Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= AAMG01001198.1 Length=123 Score E Sequences producing significant alignments: (Bits) Value seq51741 150 1e-34 >seq51741 Length=269797 Score = 150 bits (166), Expect = 1e-34 Identities = 108/123 (88%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 1 TGGAGGTTTCTTCTCCTAGTTTGGACAAGACCCCACAATCTACAGCGGAAAATGGAGTTT 60 |||||||||||||||||| |||||| ||||||||||||||| | || |||||||| || | Sbjct 57726 TGGAGGTTTCTTCTCCTAATTTGGAGAAGACCCCACAATCTGCTGCTGAAAATGGTGTAT 57785 Query 61 CCTTATATGGATTTGGGTGCTTCTGTACAAAGTTTGCCGGTGGTAACAGATCCGGTACCG 120 | |||||| ||||| ||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct 57786 CTTTATAT-GATTTAAGTGCTTCCGTACAAAGTTTGCCGGTTGTATCAGATCCGGTACCT 57844 Query 121 GAG 123 ||| Sbjct 57845 GAG 57847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297451772880