Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq22871 87.8 2e-15 seq48356 84.2 3e-14 seq52684 75.2 1e-11 seq37919 75.2 1e-11 seq31770 75.2 1e-11 seq19117 75.2 1e-11 seq6251 75.2 1e-11 seq2922 75.2 1e-11 seq39531 73.4 5e-11 seq32888 73.4 5e-11 >seq22871 Length=1061 Score = 87.8 bits (96), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 ||| | |||| ||| ||||| | ||||||| | |||||||||||||||||||| Sbjct 776 CTACAGACCAGCAAGATAGGCCAGA--GTCCTATCGTGCTATTCCATGCTAATGTATTCA 719 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 ||||| ||||||||||||||||||||||| ||||| |||| Sbjct 718 GGGCGATCGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 677 >seq48356 Length=183133 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| |||||| |||||||||||||| | | ||||| Sbjct 181481 CCAACATAATAGGACCGAAA-TCCTATAATATTATCCCATGCTAATGTATACAGAGCGTA 181423 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 181422 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAATAG 181385 >seq52684 Length=22553 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 21759 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 21701 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 21700 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 21663 >seq37919 Length=648 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 433 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 375 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 374 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 337 >seq31770 Length=765 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 628 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 570 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 569 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 532 >seq19117 Length=1307 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 355 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 413 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 414 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 451 >seq6251 Length=9118 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 7919 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 7977 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 7978 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 8015 >seq2922 Length=15139 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 7513 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 7571 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 7572 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 7609 >seq39531 Length=61116 Score = 73.4 bits (80), Expect = 5e-11 Identities = 68/84 (81%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| ||| | ||||||| | |||| |||||||||| ||| | | ||||| Sbjct 34718 CCAACGTAATAGG-ACGGAAATCCTATTATGTTATCCCATGCTAATATATACAGAGCGTA 34776 Query 72 AGCCTGCTTTGAACACTCTAATTT 95 || |||||||| ||||||||||| Sbjct 34777 GGCTTGCTTTGAGCACTCTAATTT 34800 >seq32888 Length=168383 Score = 73.4 bits (80), Expect = 5e-11 Identities = 57/67 (85%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 44 TTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAG 102 |||| |||||||||||||| | | ||||| || |||||||||||||||||||| |||| Sbjct 57982 TTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAACACTCTAATTTCTTCAAA 58041 Query 103 GTAAAAG 109 |||| || Sbjct 58042 GTAACAG 58048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594893663952