Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq425 354 1e-95 >seq425 Length=270291 Score = 354 bits (392), Expect = 1e-95 Identities = 265/310 (85%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 1 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGG 60 |||||||||| ||||| ||||||||||||||||| |||||||||||||||| || |||| Sbjct 148632 CGAGTCAATGCCCTAGAGCATGTGTAGGGGTGGGCAAAAATGGAAATTTGACTTGCTGGG 148573 Query 61 GAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCT 120 || |||||||||||||||||||||||||| || ||||| || ||||||||| |||||| Sbjct 148572 CTGAATCCGACCCGAATGTTAAAGTCGGAGCTTGTGGTGTTGACCTTGGTGATCGGACCT 148513 Query 121 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACA 180 |||| |||||||||| |||||||| ||||| ||||| || ||||| || | |||| || Sbjct 148512 TGGTAACCGGGTCGGCCTATCAAGGAGCCCCGCATGGATTTTTCTTTGTGGAAAACAGCA 148453 Query 181 AAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGAT 240 | || || |||||||||||||||||| || |||||||||||||| ||||| || |||| Sbjct 148452 AGAAAGAAGGGCAAAATAGTAAATTGGTGAAAATTGATGTTCCTGAGGAATTCTCAGGAT 148393 Query 241 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAATTTTGGATTATATTATTGTAA---GT 297 ||||||||||||||||||||||||||||||||||||||| || || ||||| ||| || Sbjct 148392 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAATTTTGTATAATCTTATTATAATTTGT 148333 Query 298 ATTTATGTAA 307 | ||||||| Sbjct 148332 AAGTATGTAA 148323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917912072448